RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PLAURQ03405 335 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 BMPERQ8N8U9 685 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 NEU4Q8WWR8 484 aaPredicted RBP11.68□□□□□ -0.54
SNPH-201ENST00000381867 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 AHCTF1Q8WYP5 2266 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 KBTBD11-OT1A0A1B0GTJ5 212 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 IL18BPO95998 194 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 RNASE6Q93091 150 aaKnown RBP11.68□□□□□ -0.54
SNPH-201ENST00000381867 FBXL15Q9H469 300 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 CELA3AP09093 270 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 HSD52Q0P140 79 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 OR5AN1Q8NGI8 311 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 C21orf62Q9NYP8 219 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 E9PLN8 166 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 IGKV3-20P01619 116 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 NUTF2P61970 127 aaKnown RBP11.68□□□□□ -0.54
SNPH-201ENST00000381867 VKORC1Q9BQB6 163 aa11.68□□□□□ -0.54
SNPH-201ENST00000381867 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 CXCL1P09341 107 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 TEX38Q6PEX7 206 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 SVILO95425 2214 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 NAPSAO96009 420 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 FBXL7Q9UJT9 491 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 GNG5P63218 68 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 ID3Q02535 119 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 DMRTA2Q96SC8 542 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
SNPH-201ENST00000381867 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 A0A0G2JMM0 328 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 A0A1W2PPB8 328 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
SNPH-201ENST00000381867 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
SNPH-201ENST00000381867 KIR3DP1A8MWS1 328 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
SNPH-201ENST00000381867 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
SNPH-201ENST00000381867 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
SNPH-201ENST00000381867 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 FAM90A1Q86YD7 464 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 SLC25A2Q9BXI2 301 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 YAE1D1Q9NRH1 226 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 TRGV3P03979 118 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 GFI1BQ5VTD9 330 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 COQ2Q96H96 371 aa11.67□□□□□ -0.54
SNPH-201ENST00000381867 CD69Q07108 199 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 FAM168AQ92567 244 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 NXT2Q9NPJ8 142 aaKnown RBP11.66□□□□□ -0.54
SNPH-201ENST00000381867 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 IGHV3-66A0A0C4DH42 116 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 DLEU1O43261 78 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 PAX1P15863 534 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 CNTFRP26992 372 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 MRPL20Q9BYC9 149 aaKnown RBP11.66□□□□□ -0.54
SNPH-201ENST00000381867 A0A1B0GW64 132 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 CACNG7P62955 275 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 C1orf194Q5T5A4 169 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 ZNF479Q96JC4 524 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 MSRB2Q9Y3D2 182 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 S4R3C0 116 aa11.66□□□□□ -0.54
SNPH-201ENST00000381867 C15orf61A6NNL5 157 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 J3QRE1 110 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 NUDT10Q8NFP7 164 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 PLPPR1Q8TBJ4 325 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 FABP5P3A8MUU1 101 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 UPK2O00526 184 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 IGHV4-39P01824 125 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 PPBPP02775 128 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 ATP5L2Q7Z4Y8 100 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 ASCL2Q99929 193 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 DPM3Q9P2X0 92 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 PAX2Q02962 417 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 SRSF1Q07955 248 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNPH-201ENST00000381867 PLA2G2CQ5R387 149 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
SNPH-201ENST00000381867 A8MWV9 139 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 CCL1P22362 96 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 TIMP3P35625 211 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 SFTA2Q6UW10 78 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 NUP210Q8TEM1 1887 aaPredicted RBP11.64□□□□□ -0.55
SNPH-201ENST00000381867 IGKCP01834 107 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 CKS1BP61024 79 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 TSKUQ8WUA8 353 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 LYPD3O95274 346 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 SAA1P0DJI8 122 aaPredicted RBP11.64□□□□□ -0.55
SNPH-201ENST00000381867 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 REG4Q9BYZ8 158 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
SNPH-201ENST00000381867 TICRRQ7Z2Z1 1910 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 CECR9P0C854 216 aa11.64□□□□□ -0.55
SNPH-201ENST00000381867 SPTBP11277 2137 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms