RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 C7orf69Q9H7B7 122 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 SEPSECSQ9HD40 501 aaKnown RBP17.04■□□□□ 0.32
GMDS-202ENST00000380815 MRPL36Q9P0J6 103 aaKnown RBP17.04■□□□□ 0.32
GMDS-202ENST00000380815 PTPN13Q12923 2485 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 VPS13CQ709C8 3753 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 TRAV20A0A0B4J274 112 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 TRAV40A0A0B4J280 105 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 J3QKU1 62 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 FBP1P09467 338 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 NPBWR1P48145 328 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 RUSC1-AS1Q66K80 236 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 LRRC75A-AS1Q8N1F1 130 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 Q8N9W7 124 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 HIF1ANQ9NWT6 349 aa17.03■□□□□ 0.32
GMDS-202ENST00000380815 ANKRD17O75179 2603 aaKnown RBP17.03■□□□□ 0.32
GMDS-202ENST00000380815 IGKV1D-37A0A075B6S9 117 aa17.02■□□□□ 0.32
GMDS-202ENST00000380815 TCRBV4S1A1TA0A5B7 111 aa17.02■□□□□ 0.32
GMDS-202ENST00000380815 CXorf1O96002 111 aa17.02■□□□□ 0.32
GMDS-202ENST00000380815 IGHV3-48P01763 117 aa17.02■□□□□ 0.32
GMDS-202ENST00000380815 SELENOTP62341 195 aa17.02■□□□□ 0.32
GMDS-202ENST00000380815 NDUFS6O75380 124 aaKnown RBP17.02■□□□□ 0.31
GMDS-202ENST00000380815 MT-CO2P00403 227 aa17.02■□□□□ 0.31
GMDS-202ENST00000380815 GATA2P23769 480 aaPredicted RBP17.02■□□□□ 0.31
GMDS-202ENST00000380815 MEF2BQ02080 365 aaPredicted RBP17.02■□□□□ 0.31
GMDS-202ENST00000380815 DEFB113Q30KQ7 82 aa17.02■□□□□ 0.31
GMDS-202ENST00000380815 IQCF2Q8IXL9 164 aa17.02■□□□□ 0.31
GMDS-202ENST00000380815 FAM103A1Q9BTL3 118 aaKnown RBP17.02■□□□□ 0.31
GMDS-202ENST00000380815 CENPEQ02224 2701 aa17.01■□□□□ 0.31
GMDS-202ENST00000380815 IGHV3OR16-10A0A075B7F0 116 aa17.01■□□□□ 0.31
GMDS-202ENST00000380815 NPIPB5A8MRT5 1133 aa17.01■□□□□ 0.31
GMDS-202ENST00000380815 HLA-DRB1P01911 266 aa17.01■□□□□ 0.31
GMDS-202ENST00000380815 ARL14EPLP0DKL9 152 aa17.01■□□□□ 0.31
GMDS-202ENST00000380815 NANPQ8TBE9 248 aa17.01■□□□□ 0.31
GMDS-202ENST00000380815 I3L2K1 104 aa17■□□□□ 0.31
GMDS-202ENST00000380815 NDPQ00604 133 aa17■□□□□ 0.31
GMDS-202ENST00000380815 FAM78BQ5VT40 261 aa17■□□□□ 0.31
GMDS-202ENST00000380815 BRD3OSQ6XYD6 125 aa17■□□□□ 0.31
GMDS-202ENST00000380815 SPNS3Q6ZMD2 512 aa17■□□□□ 0.31
GMDS-202ENST00000380815 LINC01356Q8N9X3 169 aa17■□□□□ 0.31
GMDS-202ENST00000380815 TRGV9Q99603 122 aa17■□□□□ 0.31
GMDS-202ENST00000380815 MEGF9Q9H1U4 602 aa17■□□□□ 0.31
GMDS-202ENST00000380815 FUT9Q9Y231 359 aa17■□□□□ 0.31
GMDS-202ENST00000380815 CELSR2Q9HCU4 2923 aa17■□□□□ 0.31
GMDS-202ENST00000380815 IGHV7-81A0A0B4J1V7 117 aa17■□□□□ 0.31
GMDS-202ENST00000380815 DNASE2O00115 360 aaPredicted RBP17■□□□□ 0.31
GMDS-202ENST00000380815 OR5G3P0C626 314 aa17■□□□□ 0.31
GMDS-202ENST00000380815 IGHV4-38-2P0DP08 117 aa17■□□□□ 0.31
GMDS-202ENST00000380815 CEBPGP53567 150 aa17■□□□□ 0.31
GMDS-202ENST00000380815 CD81P60033 236 aa17■□□□□ 0.31
GMDS-202ENST00000380815 ASPHD1Q5U4P2 390 aa17■□□□□ 0.31
GMDS-202ENST00000380815 SPATA31B1PQ5VZV4 182 aa17■□□□□ 0.31
GMDS-202ENST00000380815 RASL11BQ9BPW5 248 aa17■□□□□ 0.31
GMDS-202ENST00000380815 TNFRSF19Q9NS68 423 aa17■□□□□ 0.31
GMDS-202ENST00000380815 ZNF90Q03938 601 aa16.99■□□□□ 0.31
GMDS-202ENST00000380815 LOXL1Q08397 574 aaPredicted RBP16.99■□□□□ 0.31
GMDS-202ENST00000380815 TTC9CQ8N5M4 171 aa16.99■□□□□ 0.31
GMDS-202ENST00000380815 GATAD1Q8WUU5 269 aa16.99■□□□□ 0.31
GMDS-202ENST00000380815 POLQO75417 2590 aa16.99■□□□□ 0.31
GMDS-202ENST00000380815 PSMB11A5LHX3 300 aa16.98■□□□□ 0.31
GMDS-202ENST00000380815 PAGE4O60829 102 aa16.98■□□□□ 0.31
GMDS-202ENST00000380815 FAM90A2PQ658T7 463 aa16.98■□□□□ 0.31
GMDS-202ENST00000380815 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.98■□□□□ 0.31
GMDS-202ENST00000380815 RNF2Q99496 336 aa16.98■□□□□ 0.31
GMDS-202ENST00000380815 A0A0U1RQK1 487 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 FAM74A7A6NL05 159 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 FAM74A3Q4VXF1 159 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 MIR17HGQ75NE6 70 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 OR4X1Q8NH49 305 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 TMEM37Q8WXS4 190 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 DNAJC4Q9NNZ3 241 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 SVEP1Q4LDE5 3571 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 IGHV3-21A0A0B4J1V1 117 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 TMEM250H0YL14 139 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 AWAT1Q58HT5 328 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 SUN5Q8TC36 379 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 PFDN5Q99471 154 aa16.97■□□□□ 0.31
GMDS-202ENST00000380815 MRPL32Q9BYC8 188 aaKnown RBP16.97■□□□□ 0.31
GMDS-202ENST00000380815 TECRQ9NZ01 308 aaKnown RBP16.97■□□□□ 0.31
GMDS-202ENST00000380815 PUS1Q9Y606 427 aaKnown RBP eCLIP16.97■□□□□ 0.31
GMDS-202ENST00000380815 H3BQ15 152 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 K7EIM0 57 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 M0R036 132 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 EGR2P11161 476 aaPredicted RBP16.96■□□□□ 0.31
GMDS-202ENST00000380815 GCHFRP30047 84 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 OR1L4Q8NGR5 311 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 PIFOQ8TCI5 191 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 NIPSNAP3BQ9BS92 247 aa16.96■□□□□ 0.31
GMDS-202ENST00000380815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.96■□□□□ 0.315e-9■■■□□ 17.3
GMDS-202ENST00000380815 TAS2R45P59539 299 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 OR4F5Q8NH21 305 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 MBD6Q96DN6 1003 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 RBM14Q96PK6 669 aaKnown RBP16.95■□□□□ 0.3
GMDS-202ENST00000380815 PSMG3-AS1Q96PY0 264 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 OR4F4Q96R69 305 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 TXNDC17Q9BRA2 123 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 NAV2Q8IVL1 2488 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 TENM4Q6N022 2769 aa16.95■□□□□ 0.3
GMDS-202ENST00000380815 MAP1AP78559 2803 aaPredicted RBP16.95■□□□□ 0.3
GMDS-202ENST00000380815 IGLV11-55A0A075B6I3 123 aa16.94■□□□□ 0.3
GMDS-202ENST00000380815 C11orf94C9JXX5 98 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms