RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SLC25A47Q6Q0C1 308 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 MOGAT3Q86VF5 341 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 PRO0461Q9UI25 63 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 IGKV1-9A0A0C4DH69 117 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 RPL7P18124 248 aaKnown RBP7.72□□□□□ -1.17
PTPRA-204ENST00000380393 CD27P26842 260 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
PTPRA-204ENST00000380393 MRPS21P82921 87 aaKnown RBP7.72□□□□□ -1.17
PTPRA-204ENST00000380393 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 ZNF818PQ6ZRF7 136 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 HSD17B10Q99714 261 aaKnown RBP7.72□□□□□ -1.17
PTPRA-204ENST00000380393 ARHGEF17Q96PE2 2063 aaPredicted RBP7.72□□□□□ -1.17
PTPRA-204ENST00000380393 TMED7-TICAM2A0A0A6YYA0 188 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 C9JCJ5 164 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 FCGR2AP12318 317 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 SRD5A1P18405 259 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 OSR2Q8N2R0 312 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 ZNF645Q8N7E2 425 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 ARL14EPLP0DKL9 152 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 BCL3P20749 454 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 CENPWQ5EE01 88 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 Q6ZRM9 215 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 NFE4Q86UQ8 179 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 TMEM147Q9BVK8 224 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 NPCDR1Q9BY65 106 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 OSTCQ9NRP0 149 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 DUSP13Q9UII6 198 aa7.72□□□□□ -1.17
PTPRA-204ENST00000380393 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 IGLL5B9A064 214 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 CELA2BP08218 269 aaPredicted RBP7.71□□□□□ -1.17
PTPRA-204ENST00000380393 OR5AL1P0C617 328 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 RPS16P62249 146 aaKnown RBP7.71□□□□□ -1.17
PTPRA-204ENST00000380393 PQLC2Q6ZP29 291 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 PPP1R32Q7Z5V6 425 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 RBMXL3Q8N7X1 1067 aaKnown RBP7.71□□□□□ -1.17
PTPRA-204ENST00000380393 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 IL1F10Q8WWZ1 152 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 ASXL3Q9C0F0 2248 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 TMEM133Q9H2Q1 129 aa7.71□□□□□ -1.17
PTPRA-204ENST00000380393 COL4A2P08572 1712 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 LINC00694P0DN24 101 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 OPRK1P41145 380 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 NMUP48645 174 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 RPS21P63220 83 aaKnown RBP7.71□□□□□ -1.18
PTPRA-204ENST00000380393 C1orf61Q13536 156 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 SGCBQ16585 318 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 ZNF474Q6S9Z5 364 aaPredicted RBP7.71□□□□□ -1.18
PTPRA-204ENST00000380393 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
PTPRA-204ENST00000380393 BMFQ96LC9 184 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 C21orf140B9A014 251 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 FAM90A26D6RGX4 464 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 SNCGO76070 127 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 TNFRSF6BO95407 300 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 RBP4P02753 201 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 EVI2AP22794 236 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 GDF5OSQ5U4N7 250 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 FAM169BQ8N8A8 192 aa7.71□□□□□ -1.18
PTPRA-204ENST00000380393 SSBP3Q9BWW4 388 aaPredicted RBP7.71□□□□□ -1.18
PTPRA-204ENST00000380393 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 CACNA1EQ15878 2313 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 SMIM27A0A1W2PRY6 76 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
PTPRA-204ENST00000380393 OR51H1Q8NH63 302 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 Q96M66 194 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 IGHV4-34P06331 123 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 MBNL2Q5VZF2 373 aaKnown RBP7.7□□□□□ -1.18
PTPRA-204ENST00000380393 HOXB13Q92826 284 aaPredicted RBP7.7□□□□□ -1.18
PTPRA-204ENST00000380393 FSCN3Q9NQT6 498 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 CCL28Q9NRJ3 127 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 SIT1Q9Y3P8 196 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 YTHDF2Q9Y5A9 579 aaKnown RBP7.7□□□□□ -1.18
PTPRA-204ENST00000380393 TANC2Q9HCD6 1990 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 ESPL1Q14674 2120 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 EDDM3BP56851 147 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 RNPS1Q15287 305 aaKnown RBP7.7□□□□□ -1.18
PTPRA-204ENST00000380393 POU2AF1Q16633 256 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 PCP2Q8IVA1 136 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 OR13H1Q8NG92 308 aa7.7□□□□□ -1.18
PTPRA-204ENST00000380393 PHLDA1Q8WV24 401 aaPredicted RBP7.7□□□□□ -1.18
PTPRA-204ENST00000380393 K7EMI3 77 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 MOSP00540 346 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 FNDC7Q5VTL7 733 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 C16orf47Q6ZP98 133 aaPredicted RBP7.69□□□□□ -1.18
PTPRA-204ENST00000380393 TRIB1Q96RU8 372 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 UNC13CQ8NB66 2214 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 F8WDY8 70 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 OR2J3O76001 311 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 SLC22A18ASQ8N1D0 253 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 LSM4Q9Y4Z0 139 aaKnown RBP7.69□□□□□ -1.18
PTPRA-204ENST00000380393 RP1P56715 2156 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 RIF1Q5UIP0 2472 aaKnown RBP7.69□□□□□ -1.18
PTPRA-204ENST00000380393 SPRY1O43609 319 aaPredicted RBP7.69□□□□□ -1.18
PTPRA-204ENST00000380393 FOXS1O43638 330 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 LPAL2Q16609 132 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 RASL11AQ6T310 242 aa7.69□□□□□ -1.18
PTPRA-204ENST00000380393 WIPF2Q8TF74 440 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms