RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 PLNP26678 52 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 NIT1Q86X76 327 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 GDF15Q99988 308 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 MBNL3Q9NUK0 354 aaKnown RBP10.39□□□□□ -0.75
CHD3-203ENST00000380358 GCM2O75603 506 aaPredicted RBP10.39□□□□□ -0.75
CHD3-203ENST00000380358 VAX1Q5SQQ9 334 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 PUSL1Q8N0Z8 303 aaKnown RBP10.39□□□□□ -0.75
CHD3-203ENST00000380358 TRAV12-1A0A0B4J245 112 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 CD160O95971 181 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 LINC00299Q6ZSB3 139 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 SAA2-SAA4A0A096LPE2 208 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 EREGO14944 169 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 MLNRO43193 412 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 SAA2P0DJI9 122 aaPredicted RBP10.39□□□□□ -0.75
CHD3-203ENST00000380358 THAP8Q8NA92 274 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 HIST1H2BAQ96A08 127 aa10.39□□□□□ -0.75
CHD3-203ENST00000380358 MYO5AQ9Y4I1 1855 aaKnown RBP10.39□□□□□ -0.75
CHD3-203ENST00000380358 SRSF1Q07955 248 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHD3-203ENST00000380358 C17orf100A8MU93 164 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 C2orf68Q2NKX9 166 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 GGTLC1Q9BX51 225 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 H3BUX3 64 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
CHD3-203ENST00000380358 GHRHP01286 108 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 IGLV2-23P01705 113 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 SNHG12Q9BXW3 62 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 AKAP11Q9UKA4 1901 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 PRSS23O95084 383 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 ERCC8Q13216 396 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 TMEM187Q14656 261 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 GAGE2AQ6NT46 116 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 PDCD11Q14690 1871 aaKnown RBP10.38□□□□□ -0.75
CHD3-203ENST00000380358 AQP3Q92482 292 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 RNASE6Q93091 150 aaKnown RBP10.38□□□□□ -0.75
CHD3-203ENST00000380358 TJP1Q07157 1748 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 PAPPA2Q9BXP8 1791 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.38□□□□□ -0.75
CHD3-203ENST00000380358 SPACA3Q8IXA5 215 aa10.38□□□□□ -0.75
CHD3-203ENST00000380358 TRAV5A0A0B4J249 113 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 TNFRSF6BO95407 300 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 PFN2P35080 140 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
CHD3-203ENST00000380358 RAMP3O60896 148 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 GPX4P36969 197 aaPredicted RBP10.37□□□□□ -0.75
CHD3-203ENST00000380358 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
CHD3-203ENST00000380358 CSRP2Q16527 193 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 FOXD3Q9UJU5 478 aaPredicted RBP10.37□□□□□ -0.75
CHD3-203ENST00000380358 TRGV11A0A075B6L2 103 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 PSG7Q13046 419 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 IL36BQ9NZH7 164 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 A8MXK9 166 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 KLF17Q5JT82 389 aaPredicted RBP10.37□□□□□ -0.75
CHD3-203ENST00000380358 HAPLN4Q86UW8 402 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 SRRM4A7MD48 611 aaKnown RBP10.37□□□□□ -0.75
CHD3-203ENST00000380358 MPTX1A8MV57 137 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 RNF125Q96EQ8 232 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 MSRB2Q9Y3D2 182 aa10.37□□□□□ -0.75
CHD3-203ENST00000380358 MPDZO75970 2070 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 SIGLEC1Q9BZZ2 1709 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 CEACAM1P13688 526 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 TMEM174Q8WUU8 243 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 SPXQ9BT56 116 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 ABCA1O95477 2261 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 TCRAP04437 139 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 EXOC3-AS1Q8N2X6 119 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 DPM2O94777 84 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 ADMP35318 185 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 DOCK1Q14185 1865 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 H3BMM0 161 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 NXPH4O95158 308 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 UBE2WQ96B02 151 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 Q96M66 194 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 SPTBN1Q01082 2364 aaKnown RBP10.36□□□□□ -0.75
CHD3-203ENST00000380358 KDM3BQ7LBC6 1761 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 NKAPP1Q8N9T2 125 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 TRAV41A0A0B4J266 112 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 HLA-DQB1P01920 261 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 STPG2Q8N412 459 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
CHD3-203ENST00000380358 RPUSD1Q9UJJ7 312 aaKnown RBP10.36□□□□□ -0.75
CHD3-203ENST00000380358 ITGB4P16144 1822 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 NRAPQ86VF7 1730 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 EPDR1Q9UM22 224 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 IGKCP01834 107 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
CHD3-203ENST00000380358 C15orf32Q32M92 178 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 SPTA1P02549 2419 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 Q9HAA7 133 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms