RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 Q8TCH9 128 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 MRAP2Q96G30 205 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 GINS3Q9BRX5 216 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 ENY2Q9NPA8 101 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 NPIPB11E5RHQ5 1161 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 GZMBP10144 247 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 BTNL8Q6UX41 500 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 TCF23Q7RTU1 214 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 OR10P1Q8NGE3 313 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 HSD17B10Q99714 261 aaKnown RBP8.84□□□□□ -0.99
NEDD9-201ENST00000379433 IGHV1-69-2A0A0G2JMI3 117 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 GFI1BQ5VTD9 330 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 OR1P1Q8NH06 330 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 SSMEM1Q8WWF3 244 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 TMEM204Q9BSN7 226 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
NEDD9-201ENST00000379433 TRAV30A0A087WSZ9 112 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 A0A0U1RRA0 63 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 hADV38S2A0JD32 116 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 UMAD1C9J7I0 102 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 K7EN84 100 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 NDUFS7O75251 213 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 TOX4O94842 621 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 TMEM200BQ69YZ2 307 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 ZNF788Q6ZQV5 615 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
NEDD9-201ENST00000379433 OR5B12Q96R08 314 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 PATZ1Q9HBE1 687 aaKnown RBP8.83□□□□□ -1
NEDD9-201ENST00000379433 PARP11Q9NR21 331 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 CTSZQ9UBR2 303 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 ZNF835Q9Y2P0 537 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 TET2Q6N021 2002 aaPredicted RBP8.83□□□□□ -1
NEDD9-201ENST00000379433 TMEM178BH3BS89 294 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 RBFOX2O43251 390 aaKnown RBP eCLIP8.83□□□□□ -1
NEDD9-201ENST00000379433 CD24P25063 80 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 SNCAP37840 140 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 LRRC10Q5BKY1 277 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 MRPL41Q8IXM3 137 aaKnown RBP8.83□□□□□ -1
NEDD9-201ENST00000379433 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 IL22RA2Q969J5 263 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 JPT1Q9UK76 154 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 RRHO14718 337 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 FCN3O75636 299 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 CA7P43166 264 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 ZNF787Q6DD87 383 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 RBPMS2Q6ZRY4 209 aaKnown RBP8.83□□□□□ -1
NEDD9-201ENST00000379433 CENPVQ7Z7K6 275 aaPredicted RBP8.83□□□□□ -1
NEDD9-201ENST00000379433 C1orf174Q8IYL3 243 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 LRRC75A-AS1Q8N1F1 130 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 ZNF714Q96N38 554 aa8.83□□□□□ -1
NEDD9-201ENST00000379433 DUXBA0A1W2PPF3 345 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 DVL1P1P54792 670 aaPredicted RBP8.82□□□□□ -1
NEDD9-201ENST00000379433 GAGE5Q13069 117 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 GAGE6Q13070 117 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 IL34Q6ZMJ4 242 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 MOB3BQ86TA1 216 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 FAM24BQ8N5W8 94 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 ZNF525Q8N782 197 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 NUP37Q8NFH4 326 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 IDI2-AS1Q9NZ38 188 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 NOTCH2Q04721 2471 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 IGHV3-21A0A0B4J1V1 117 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 TYMSP04818 313 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 SOD3P08294 240 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 C10orf55Q5SWW7 151 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 NIT1Q86X76 327 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 HIST3H2BBQ8N257 126 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 ZNF709Q8N972 641 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 MRPL20Q9BYC9 149 aaKnown RBP8.82□□□□□ -1
NEDD9-201ENST00000379433 C11orf1Q9H5F2 150 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 DSCAML1Q8TD84 2053 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 REG1AP05451 166 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 UCNP55089 124 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 TAS2R30P59541 319 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 MLANAQ16655 118 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 DOPEY2Q9Y3R5 2298 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 USP24Q9UPU5 2620 aa8.82□□□□□ -1
NEDD9-201ENST00000379433 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
NEDD9-201ENST00000379433 YPEL1O60688 119 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 CLEC12BQ2HXU8 276 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 PRR31Q5SQ13 230 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 CYB561D1Q8N8Q1 229 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 GATAD1Q8WUU5 269 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
NEDD9-201ENST00000379433 YPEL2Q96QA6 119 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 SLC39A9Q9NUM3 307 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 AURKAIP1Q9NWT8 199 aaPredicted RBP8.81□□□□□ -1
NEDD9-201ENST00000379433 HPRT1P00492 218 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 WNT2P09544 360 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 GNB1P62873 340 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 TEX38Q6PEX7 206 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 ZNF66Q6ZN08 573 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 Q6ZVH6 145 aa8.81□□□□□ -1
NEDD9-201ENST00000379433 SSBP4Q9BWG4 385 aaPredicted RBP8.81□□□□□ -1
NEDD9-201ENST00000379433 ZNF727A8MUV8 499 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms