RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 DYNC1H1Q14204 4646 aaKnown RBP12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 LOC100506127A0A0U1RQW1 187 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 A0A1B0GU03 582 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 ZNF705EA8MWA4 302 aaPredicted RBP12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 AMBPP02760 352 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 NPBWR1P48145 328 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 C12orf74Q32Q52 190 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
PDLIM4-202ENST00000379018 ABCA13Q86UQ4 5058 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 A0A0A6YYH2 397 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 TRAV2A0A0B4J234 112 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 A6NJ64 397 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 NPPCP23582 126 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 PPP5CP53041 499 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 PRCDQ00LT1 54 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 TMEM41BQ5BJD5 291 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 ZNF575Q86XF7 245 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 ZNF114Q8NC26 417 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 MRGPRFQ96AM1 343 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 KRTAP4-5Q9BYR2 181 aa12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 NAA50Q9GZZ1 169 aaKnown RBP12.82□□□□□ -0.36
PDLIM4-202ENST00000379018 K7EQG2 157 aa12.81□□□□□ -0.36
PDLIM4-202ENST00000379018 P2RY1P47900 373 aa12.81□□□□□ -0.36
PDLIM4-202ENST00000379018 IZUMO4Q1ZYL8 232 aa12.81□□□□□ -0.36
PDLIM4-202ENST00000379018 DHRS11Q6UWP2 260 aa12.81□□□□□ -0.36
PDLIM4-202ENST00000379018 METTL26Q96S19 204 aa12.81□□□□□ -0.36
PDLIM4-202ENST00000379018 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 A0A1W2PS18 150 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 IFNA10P01566 189 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 SCAND1P57086 179 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 TAS2R46P59540 309 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 TBC1D26Q86UD7 250 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 SEC22AQ96IW7 307 aa12.8□□□□□ -0.36
PDLIM4-202ENST00000379018 TMEM50AO95807 157 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 IGKV1-39P01597 117 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 IGKV1D-39P04432 117 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 HLA-DMAP28067 261 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 S100GP29377 79 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 SNCAP37840 140 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 EMP1P54849 157 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 HSPE1P61604 102 aaKnown RBP12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 DHRS2Q13268 280 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 PSMG4Q5JS54 123 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 CADM3Q8N126 398 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 OR6F1Q8NGZ6 308 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 DYNC2LI1Q8TCX1 351 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 TMEM230Q96A57 120 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 GRAMD2BQ96HH9 432 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 NARS2Q96I59 477 aaKnown RBP12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 XCL2Q9UBD3 114 aa12.79□□□□□ -0.36
PDLIM4-202ENST00000379018 HRH1P35367 487 aa12.78□□□□□ -0.36
PDLIM4-202ENST00000379018 TSPAN5P62079 268 aa12.78□□□□□ -0.36
PDLIM4-202ENST00000379018 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
PDLIM4-202ENST00000379018 ZNF182P17025 639 aaPredicted RBP12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 NPY1RP25929 384 aa12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 OPRK1P41145 380 aa12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 SPCS2Q15005 226 aa12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 CSNK1G2-AS1Q8NCQ2 148 aa12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 MRPL36Q9P0J6 103 aaKnown RBP12.77□□□□□ -0.37
PDLIM4-202ENST00000379018 HELTA6NFD8 242 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 IFNA21P01568 189 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 IFNA17P01571 189 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 HOXA1P49639 335 aaPredicted RBP12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 TAS2R20P59543 309 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 LGALS9BQ3B8N2 356 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 TIGITQ495A1 244 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 DCANP1Q8TF63 244 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 S100A16Q96FQ6 103 aaKnown RBP12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 RAB40CQ96S21 281 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 WDR12Q9GZL7 423 aaKnown RBP12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 PKD1P98161 4303 aa12.76□□□□□ -0.37
PDLIM4-202ENST00000379018 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
PDLIM4-202ENST00000379018 CRYBB3P26998 211 aa12.75□□□□□ -0.37
PDLIM4-202ENST00000379018 MLANAQ16655 118 aa12.75□□□□□ -0.37
PDLIM4-202ENST00000379018 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
PDLIM4-202ENST00000379018 CLN5O75503 358 aa12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 HTN3P15516 51 aa12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 EIF2B2P49770 351 aaKnown RBP12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 AKR1C2P52895 323 aa12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 UBE2NLQ5JXB2 153 aa12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 FNDC4Q9H6D8 234 aaPredicted RBP12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 ENY2Q9NPA8 101 aa12.74□□□□□ -0.37
PDLIM4-202ENST00000379018 SCGB2A1O75556 95 aa12.73□□□□□ -0.37
PDLIM4-202ENST00000379018 RNASE2P10153 161 aaKnown RBP12.73□□□□□ -0.37
PDLIM4-202ENST00000379018 PRSS3P35030 304 aa12.73□□□□□ -0.37
PDLIM4-202ENST00000379018 TGFBR1P36897 503 aa12.73□□□□□ -0.37
PDLIM4-202ENST00000379018 ETV6P41212 452 aa12.73□□□□□ -0.37
PDLIM4-202ENST00000379018 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDLIM4-202ENST00000379018 FXYD7P58549 80 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms