RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 TMEM190Q8WZ59 177 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 RAB37Q96AX2 223 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 SMIM12Q96EX1 92 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 LPAR2Q9HBW0 351 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 PHLDA3Q9Y5J5 127 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 ATMQ13315 3056 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 NPIPB6E9PJ23 425 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 H3BVH4 76 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 IGHV1-2P23083 117 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 NBL1P41271 181 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 TNFSF10P50591 281 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 MORN2Q502X0 79 aa7.01□□□□□ -1.29
VPS36-201ENST00000378060 ATP5LO75964 103 aa7□□□□□ -1.29
VPS36-201ENST00000378060 IGHV3-48P01763 117 aa7□□□□□ -1.29
VPS36-201ENST00000378060 CD55P08174 381 aa7□□□□□ -1.29
VPS36-201ENST00000378060 CXCL1P09341 107 aa7□□□□□ -1.29
VPS36-201ENST00000378060 SFTPCP11686 197 aa7□□□□□ -1.29
VPS36-201ENST00000378060 DMRTA1Q5VZB9 504 aa7□□□□□ -1.29
VPS36-201ENST00000378060 TMEM42Q69YG0 159 aa7□□□□□ -1.29
VPS36-201ENST00000378060 EBLN2Q6P2I7 272 aa7□□□□□ -1.29
VPS36-201ENST00000378060 OCC1Q8TAD7 63 aa7□□□□□ -1.29
VPS36-201ENST00000378060 PHF3Q92576 2039 aaKnown RBP7□□□□□ -1.29
VPS36-201ENST00000378060 NEUROG1Q92886 237 aa7□□□□□ -1.29
VPS36-201ENST00000378060 PRELID3AQ96N28 172 aa7□□□□□ -1.29
VPS36-201ENST00000378060 TRBV6-6A0A0A6YYG2 114 aa7□□□□□ -1.29
VPS36-201ENST00000378060 OR11H12B2RN74 326 aa7□□□□□ -1.29
VPS36-201ENST00000378060 H3BTX0 84 aa7□□□□□ -1.29
VPS36-201ENST00000378060 PPP1R17O96001 155 aa7□□□□□ -1.29
VPS36-201ENST00000378060 SMIM13P0DJ93 91 aa7□□□□□ -1.29
VPS36-201ENST00000378060 DUTP33316 252 aaKnown RBP7□□□□□ -1.29
VPS36-201ENST00000378060 TM4SF20Q53R12 229 aa7□□□□□ -1.29
VPS36-201ENST00000378060 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
VPS36-201ENST00000378060 OR11H1Q8NG94 326 aa7□□□□□ -1.29
VPS36-201ENST00000378060 OR11H2Q8NH07 326 aa7□□□□□ -1.29
VPS36-201ENST00000378060 DCTN5Q9BTE1 182 aa7□□□□□ -1.29
VPS36-201ENST00000378060 UBTD1Q9HAC8 227 aa7□□□□□ -1.29
VPS36-201ENST00000378060 MGAQ8IWI9 3026 aa7□□□□□ -1.29
VPS36-201ENST00000378060 ZNF324O75467 553 aaPredicted RBP7□□□□□ -1.29
VPS36-201ENST00000378060 AMBPP02760 352 aa7□□□□□ -1.29
VPS36-201ENST00000378060 RNF224P0DH78 156 aa7□□□□□ -1.29
VPS36-201ENST00000378060 NPPCP23582 126 aa7□□□□□ -1.29
VPS36-201ENST00000378060 FHL1Q13642 323 aa7□□□□□ -1.29
VPS36-201ENST00000378060 OR10J3Q5JRS4 329 aa7□□□□□ -1.29
VPS36-201ENST00000378060 NIT1Q86X76 327 aa7□□□□□ -1.29
VPS36-201ENST00000378060 BEND2Q8NDZ0 799 aa7□□□□□ -1.29
VPS36-201ENST00000378060 FDCSPQ8NFU4 85 aa7□□□□□ -1.29
VPS36-201ENST00000378060 PCNX2A6NKB5 2137 aa7□□□□□ -1.29
VPS36-201ENST00000378060 HIGD1CA8MV81 97 aa7□□□□□ -1.29
VPS36-201ENST00000378060 APOHP02749 345 aaPredicted RBP7□□□□□ -1.29
VPS36-201ENST00000378060 STAG3L3P0CL85 134 aa7□□□□□ -1.29
VPS36-201ENST00000378060 ADMP35318 185 aa7□□□□□ -1.29
VPS36-201ENST00000378060 TMEM14EPQ6UXP3 125 aa7□□□□□ -1.29
VPS36-201ENST00000378060 MTURNQ8N3F0 131 aa7□□□□□ -1.29
VPS36-201ENST00000378060 PNRC2Q9NPJ4 139 aaKnown RBP7□□□□□ -1.29
VPS36-201ENST00000378060 DPM3Q9P2X0 92 aa7□□□□□ -1.29
VPS36-201ENST00000378060 ADAMTS20P59510 1910 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 TRBV20OR9-2A0A075B6H5 130 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 CLPSP04118 112 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 CD69Q07108 199 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 EFNB3Q15768 340 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 WDR82Q6UXN9 313 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 RPP25LQ8N5L8 163 aaKnown RBP6.99□□□□□ -1.29
VPS36-201ENST00000378060 TEX45Q8NA69 505 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 AGMATQ9BSE5 352 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 ZNF256Q9Y2P7 627 aaPredicted RBP6.99□□□□□ -1.29
VPS36-201ENST00000378060 TRAV9-2A0A087WT02 112 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 ZFP36L1Q07352 338 aaKnown RBP6.99□□□□□ -1.29
VPS36-201ENST00000378060 FAM19A2Q8N3H0 131 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 PNKDQ8N490 385 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 TTC9CQ8N5M4 171 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 FAM216BQ8N7L0 139 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 IGKV1-27A0A075B6S5 117 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 LOC105371242A0A075B767 164 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 C7orf71A4D174 169 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 RAMP3O60896 148 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 TIMP3P35625 211 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 PRCDQ00LT1 54 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 CSRP2Q16527 193 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 FAM53AQ6NSI3 398 aaPredicted RBP6.99□□□□□ -1.29
VPS36-201ENST00000378060 RTN4RL2Q86UN3 420 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 ORMDL3Q8N138 153 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 OTORQ9NRC9 128 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 SEMA5BQ9P283 1151 aa6.99□□□□□ -1.29
VPS36-201ENST00000378060 TNFSF13O75888 250 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 APOBEC3AP31941 199 aaPredicted RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 KIR2DL4Q99706 377 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 ZNF257Q9Y2Q1 563 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 NBEAQ8NFP9 2946 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 HEATR1Q9H583 2144 aaKnown RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 C9JCJ5 164 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 PF4V1P10720 104 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 HIST1H1AQ02539 215 aaPredicted RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 ATP1A1-AS1Q5TC04 95 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 ASCL4Q6XD76 172 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 TCF23Q7RTU1 214 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 EEF1AKMT3Q96AZ1 226 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 MRPL20Q9BYC9 149 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms