RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 HSPB9Q9BQS6 159 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 TUBA4BQ9H853 241 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 TBL2Q9Y4P3 447 aaKnown RBP16.23■□□□□ 0.19
PCDH8-202ENST00000377942 IGKV1D-17A0A075B6S4 117 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 FAM181BA6NEQ2 426 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 SSC4DQ8WTU2 575 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 TBX15Q96SF7 602 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 SRIP30626 198 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 PET117Q6UWS5 81 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 COQ2Q96H96 371 aa16.23■□□□□ 0.19
PCDH8-202ENST00000377942 TRAV41A0A0B4J266 112 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 A0A1B0GW15 77 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 ZNF56Q15929 161 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 PMCHL1Q16048 86 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 GTF2H5Q6ZYL4 71 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 OR10AG1Q8NH19 301 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 COL25A1Q9BXS0 654 aaPredicted RBP16.22■□□□□ 0.19
PCDH8-202ENST00000377942 A0A1W2PRE2 83 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 RNF224P0DH78 156 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 CFPP27918 469 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 IL36BQ9NZH7 164 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 FANCMQ8IYD8 2048 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 POLEQ07864 2286 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 NEU1Q99519 415 aa16.22■□□□□ 0.19
PCDH8-202ENST00000377942 TRAV20A0A0B4J274 112 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 SCO2A0A1W2PP80 73 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 PRR30Q53SZ7 412 aaPredicted RBP16.21■□□□□ 0.19
PCDH8-202ENST00000377942 KIAA1671Q9BY89 1806 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 TRAV9-1A0A075B6T8 112 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 ATP5G3P48201 142 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 A6NDN8 102 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 ITGB1BP1O14713 200 aa16.21■□□□□ 0.19
PCDH8-202ENST00000377942 GGCTO75223 188 aaKnown RBP16.21■□□□□ 0.19
PCDH8-202ENST00000377942 ITLN2Q8WWU7 325 aaPredicted RBP16.21■□□□□ 0.19
PCDH8-202ENST00000377942 A0A087X0M5 115 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 A0A1B0GX30 115 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 M0R3E3 92 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 SUPT4H1P63272 117 aaKnown RBP16.2■□□□□ 0.18
PCDH8-202ENST00000377942 CYB5R2Q6BCY4 276 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 DUSP14O95147 198 aaKnown RBP16.2■□□□□ 0.18
PCDH8-202ENST00000377942 CD55P08174 381 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 FAM74A4Q5TZK3 123 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 OR1N2Q8NGR9 330 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 SPTAN1Q13813 2472 aaKnown RBP16.2■□□□□ 0.18
PCDH8-202ENST00000377942 TNFSF13O75888 250 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 COL8A2P25067 703 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 OR4C5Q8NGB2 326 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 ZNF502Q8TBZ5 544 aa16.2■□□□□ 0.18
PCDH8-202ENST00000377942 PSMB2P49721 201 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 IGF2-ASQ6U949 168 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 ASCL2Q99929 193 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 ATG101Q9BSB4 218 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 A0A1B0GUT8 65 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 GATA4P43694 442 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 NMSQ5H8A3 153 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 RPP21Q9H633 154 aaKnown RBP16.19■□□□□ 0.18
PCDH8-202ENST00000377942 TRBV20OR9-2A0A075B6H5 130 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 IGHV3OR16-8A0A075B7F1 116 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 NPFFO15130 113 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 PKIAP61925 76 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 PAM16Q9Y3D7 125 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 BUB1B-PAK6H3BSN5 160 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 CCL20P78556 96 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 C8orf46Q8TAG6 207 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 TMEM70Q9BUB7 260 aa16.19■□□□□ 0.18
PCDH8-202ENST00000377942 MBNL3Q9NUK0 354 aaKnown RBP16.18■□□□□ 0.18
PCDH8-202ENST00000377942 H0YJW9 148 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 PRTN3P24158 256 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 PAX8Q06710 450 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 Q8TCH9 128 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 MIEN1Q9BRT3 115 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 SDF2L1Q9HCN8 221 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 A8MXK9 166 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 ZNF407Q9C0G0 2248 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 C5orf64Q2M2E5 130 aa16.18■□□□□ 0.18
PCDH8-202ENST00000377942 A0A087WWC5 75 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 RNF144BQ7Z419 303 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 ZNF383Q8NA42 475 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 FOLR2P14207 255 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 MBD3L1Q8WWY6 194 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 KCNS1Q96KK3 526 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 NCOR1P1Q9H4R4 102 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 MYLKQ15746 1914 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 FABP5P3A8MUU1 101 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 KLRD1Q13241 179 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 LBHQ53QV2 105 aaPredicted RBP16.17■□□□□ 0.18
PCDH8-202ENST00000377942 OR10W1Q8NGF6 305 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 NEUROG1Q92886 237 aa16.17■□□□□ 0.18
PCDH8-202ENST00000377942 A0A1W2PRX2 142 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 C9JCJ5 164 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 ZNF324O75467 553 aaPredicted RBP16.16■□□□□ 0.18
PCDH8-202ENST00000377942 EFNB3Q15768 340 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 KIAA1644Q3SXP7 199 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 DUX3Q96PT4 197 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 SPSB3Q6PJ21 355 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 ZMAT5Q9UDW3 170 aaKnown RBP16.16■□□□□ 0.18
PCDH8-202ENST00000377942 EPDR1Q9UM22 224 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 ABCA4P78363 2273 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 IGKV1-5P01602 117 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 GATA3P23771 443 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms