RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
KRT40-201ENST00000377755 RBMS3Q6XE24 437 aaKnown RBP10.26□□□□□ -0.77
KRT40-201ENST00000377755 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
KRT40-201ENST00000377755 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
KRT40-201ENST00000377755 NPY1RP25929 384 aa10.25□□□□□ -0.77
KRT40-201ENST00000377755 RPP30P78346 268 aaKnown RBP10.25□□□□□ -0.77
KRT40-201ENST00000377755 OR8G2PQ6IF36 304 aa10.25□□□□□ -0.77
KRT40-201ENST00000377755 P2RX4Q99571 388 aa10.25□□□□□ -0.77
KRT40-201ENST00000377755 ESM1Q9NQ30 184 aa10.25□□□□□ -0.77
KRT40-201ENST00000377755 MTORP42345 2549 aa10.25□□□□□ -0.77
KRT40-201ENST00000377755 FAM74A7A6NL05 159 aa10.24□□□□□ -0.77
KRT40-201ENST00000377755 FAM74A3Q4VXF1 159 aa10.24□□□□□ -0.77
KRT40-201ENST00000377755 C2orf83Q53S99 150 aa10.24□□□□□ -0.77
KRT40-201ENST00000377755 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
KRT40-201ENST00000377755 SRSF8Q9BRL6 282 aaKnown RBP10.24□□□□□ -0.77
KRT40-201ENST00000377755 RBFOX3A6NFN3 312 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 IGHG2P01859 326 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 MFAP2P55001 183 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 RUNX1Q01196 453 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 SLC38A11Q08AI6 406 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 ETV3LQ6ZN32 361 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 TMEM86BQ8N661 226 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 TIMM9Q9Y5J7 89 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 G3V318 75 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 IFNA4P05014 189 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 CTRB1P17538 263 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 NPBWR1P48145 328 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 RAB11AP62491 216 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 ECSCRQ19T08 205 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 CTRB2Q6GPI1 263 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 SLC35E3Q7Z769 313 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 MRPL41Q8IXM3 137 aaKnown RBP10.23□□□□□ -0.77
KRT40-201ENST00000377755 OR5T1Q8NG75 326 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 OR10P1Q8NGE3 313 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 WDR61Q9GZS3 305 aaKnown RBP10.23□□□□□ -0.77
KRT40-201ENST00000377755 WNT10AQ9GZT5 417 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 SMCO4Q9NRQ5 59 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 DMRT1Q9Y5R6 373 aa10.23□□□□□ -0.77
KRT40-201ENST00000377755 F8P00451 2351 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 PRSS46E5RG02 174 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 CRYGCP07315 174 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 MLANAQ16655 118 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 UNQ5815/PRO19632Q6UWF5 114 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 TTC9CQ8N5M4 171 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 ZNF114Q8NC26 417 aa10.22□□□□□ -0.77
KRT40-201ENST00000377755 F11RQ9Y624 299 aaKnown RBP10.22□□□□□ -0.77
KRT40-201ENST00000377755 C9JQL5 133 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 MBP02144 154 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 SUB1P53999 127 aaKnown RBP eCLIP10.21□□□□□ -0.77
KRT40-201ENST00000377755 ATP5IP56385 69 aaPredicted RBP10.21□□□□□ -0.77
KRT40-201ENST00000377755 SOHLH1Q5JUK2 328 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 TMEM88Q6PEY1 159 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 OR1P1Q8NH06 330 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 TAF15Q92804 592 aaKnown RBP eCLIP10.21□□□□□ -0.77
KRT40-201ENST00000377755 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.77
KRT40-201ENST00000377755 TMEM147Q9BVK8 224 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 SCRT1Q9BWW7 348 aa10.21□□□□□ -0.77
KRT40-201ENST00000377755 FN1P02751 2386 aaKnown RBP10.21□□□□□ -0.78
KRT40-201ENST00000377755 NPIPB5A8MRT5 1133 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 SOX15O60248 233 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 HSPB1P04792 205 aaKnown RBP10.21□□□□□ -0.78
KRT40-201ENST00000377755 IGF1P05019 195 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 DEFA4P12838 97 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 RHEBQ15382 184 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 KHDC3LQ587J8 217 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 PVRIGQ6DKI7 326 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 CBLN2Q8IUK8 224 aa10.21□□□□□ -0.78
KRT40-201ENST00000377755 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.78
KRT40-201ENST00000377755 A0A1B0GV50 99 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 FAM181BA6NEQ2 426 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 C17orf112F2Z3M2 114 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 M0R036 132 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 IFNA1P01562 189 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 HILS1P60008 231 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 FLI1Q01543 452 aaPredicted RBP10.2□□□□□ -0.78
KRT40-201ENST00000377755 TMEM41BQ5BJD5 291 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 C19orf54Q5BKX5 351 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 FAM122CQ6P4D5 195 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 C15orf54Q8N8G6 183 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 RSG1Q9BU20 258 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 NPFFR1Q9GZQ6 430 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 FNDC4Q9H6D8 234 aaPredicted RBP10.2□□□□□ -0.78
KRT40-201ENST00000377755 ZNF702PQ9H963 129 aa10.2□□□□□ -0.78
KRT40-201ENST00000377755 NSD1Q96L73 2696 aaPredicted RBP10.2□□□□□ -0.78
KRT40-201ENST00000377755 TRAV41A0A0B4J266 112 aa10.19□□□□□ -0.78
KRT40-201ENST00000377755 UBE2L5PA0A1B0GUS4 154 aa10.19□□□□□ -0.78
KRT40-201ENST00000377755 CLDN34H7C241 214 aa10.19□□□□□ -0.78
KRT40-201ENST00000377755 CRLF1O75462 422 aa10.19□□□□□ -0.78
KRT40-201ENST00000377755 CRIP2P52943 208 aaPredicted RBP10.19□□□□□ -0.78
KRT40-201ENST00000377755 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
KRT40-201ENST00000377755 CENPVQ7Z7K6 275 aaPredicted RBP10.19□□□□□ -0.78
KRT40-201ENST00000377755 ZNF709Q8N972 641 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms