RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FHL1Q13642 323 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 LILRA1O75019 489 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 COL5A1-AS1Q5SY13 56 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 TPTE2P1Q5T6R2 138 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 Q9H3A6 140 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 CIARTQ8N365 385 aaPredicted RBP14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 GAFA1Q96PS6 74 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 OTORQ9NRC9 128 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 GSN-AS1Q9NRJ2 163 aa14.78□□□□□ -0.04
CLSTN1-202ENST00000377298 ROS1P08922 2347 aa14.77□□□□□ -0.04
CLSTN1-202ENST00000377298 SRP19P09132 144 aaKnown RBP14.77□□□□□ -0.04
CLSTN1-202ENST00000377298 MLNRO43193 412 aa14.77□□□□□ -0.04
CLSTN1-202ENST00000377298 A6NDN8 102 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 TMEM262E9PQX1 116 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 Q6P435 159 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 C9JCJ5 164 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 H7C1H1 209 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 MYO7BQ6PIF6 2116 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 CRIM1Q9NZV1 1036 aa14.77□□□□□ -0.05
CLSTN1-202ENST00000377298 SCO2A0A1W2PP80 73 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 BIVMQ86UB2 503 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 OR10AG1Q8NH19 301 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 PROK2Q9HC23 129 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 IGHV1-3A0A0C4DH29 117 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 PRSS8Q16651 343 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 SLC25A48Q6ZT89 311 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 WDR83OSQ9Y284 106 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 ATP5G3P48201 142 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 PAPPA-AS1Q5QFB9 102 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 H0YIZ8 118 aa14.76□□□□□ -0.05
CLSTN1-202ENST00000377298 TRBV20OR9-2A0A075B6H5 130 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 IGKV3OR2-268A0A0C4DH90 116 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 SLC25A16P16260 332 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 PMCHL1Q16048 86 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 C3orf36Q3SXR2 165 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 TMEM155Q4W5P6 130 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 PRR30Q53SZ7 412 aaPredicted RBP14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 PRSS33Q8NF86 280 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 SSC4DQ8WTU2 575 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 NBASA2RRP1 2371 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 PAX1P15863 534 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 NMUP48645 174 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 DUX3Q96PT4 197 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 TRAV41A0A0B4J266 112 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 PPP1R17O96001 155 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 CD55P08174 381 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 HGFACQ04756 655 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 Q6AWC8 147 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 COL25A1Q9BXS0 654 aaPredicted RBP14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 E7EQL1 145 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 HTN3P15516 51 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 QRFPP83859 136 aa14.75□□□□□ -0.05
CLSTN1-202ENST00000377298 IGKV1D-17A0A075B6S4 117 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 OR4C46A6NHA9 309 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 KIAA1644Q3SXP7 199 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 C11orf44Q8N8P7 122 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 IL36BQ9NZH7 164 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 PET117Q6UWS5 81 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 ASCL4Q6XD76 172 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 SOX21Q9Y651 276 aaPredicted RBP14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 SRSF3P84103 164 aaKnown RBP14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 CYB5R2Q6BCY4 276 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 Q6ZS49 121 aa14.74□□□□□ -0.05
CLSTN1-202ENST00000377298 TCF21O43680 179 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 NSUN5P1Q3KNT7 163 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 REC114Q7Z4M0 266 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 COQ2Q96H96 371 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 NPFFO15130 113 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 DIDO1Q9BTC0 2240 aaKnown RBP14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 A0A1B0GUT8 65 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 CEACAM8P31997 349 aaPredicted RBP14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 RPP21Q9H633 154 aaKnown RBP14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 M0R381 172 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 FGF16O43320 207 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 TMEM167AQ8TBQ9 72 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 ABCA4P78363 2273 aa14.73□□□□□ -0.05
CLSTN1-202ENST00000377298 POLEQ07864 2286 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 A0A1B0GW15 77 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 COL8A2P25067 703 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 LINC01587Q99440 93 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 SPTAN1Q13813 2472 aaKnown RBP14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 ABCA1O95477 2261 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 A0A1W2PRE2 83 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 EMP1P54849 157 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 KLRD1Q13241 179 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 ATG101Q9BSB4 218 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 TMEM70Q9BUB7 260 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 SCN8AQ9UQD0 1980 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 PAX8Q06710 450 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 TBL2Q9Y4P3 447 aaKnown RBP14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 NDUFS8O00217 210 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 FOLR2P14207 255 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 TMEM183AQ8IXX5 376 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 OR10W1Q8NGF6 305 aa14.72□□□□□ -0.05
CLSTN1-202ENST00000377298 A0A1B0GV90 55 aa14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 DUSP14O95147 198 aaKnown RBP14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 C21orf62-AS1Q17RA5 79 aa14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 SUPT4H1P63272 117 aaKnown RBP14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 LDLRAD2Q5SZI1 272 aa14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 NEUROG1Q92886 237 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms