RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 HOXA1P49639 335 aaPredicted RBP16.89■□□□□ 0.29
C9orf47-202ENST00000375850 PIGPP57054 158 aa16.89■□□□□ 0.29
C9orf47-202ENST00000375850 SPINK9Q5DT21 86 aa16.89■□□□□ 0.29
C9orf47-202ENST00000375850 RNASE10Q5GAN6 216 aaKnown RBP16.89■□□□□ 0.29
C9orf47-202ENST00000375850 C3orf85A0A1B0GTC6 90 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 IGLL5B9A064 214 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 OPRK1P41145 380 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 LHFPL1Q86WI0 220 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 FAM24BQ8N5W8 94 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 CCDC71LQ8N9Z2 235 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 STXBP6Q8NFX7 210 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 TMEM230Q96A57 120 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 RRNAD1Q96FB5 475 aaKnown RBP16.88■□□□□ 0.29
C9orf47-202ENST00000375850 APLNQ9ULZ1 77 aa16.88■□□□□ 0.29
C9orf47-202ENST00000375850 RPS10-NUDT3A0A1W2PQS6 291 aa16.87■□□□□ 0.29
C9orf47-202ENST00000375850 ZNF705EA8MWA4 302 aaPredicted RBP16.87■□□□□ 0.29
C9orf47-202ENST00000375850 M0QYG6 137 aa16.87■□□□□ 0.29
C9orf47-202ENST00000375850 P2RY1P47900 373 aa16.87■□□□□ 0.29
C9orf47-202ENST00000375850 IZUMO4Q1ZYL8 232 aa16.87■□□□□ 0.29
C9orf47-202ENST00000375850 ZFAND1Q8TCF1 268 aa16.87■□□□□ 0.29
C9orf47-202ENST00000375850 TP53RKQ96S44 253 aa16.87■□□□□ 0.29
C9orf47-202ENST00000375850 TRAV10A0A0B4J240 114 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 IGHV4-28A0A0C4DH34 117 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 HELTA6NFD8 242 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 ELK1P19419 428 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 AP2S1P53680 142 aaPredicted RBP16.86■□□□□ 0.29
C9orf47-202ENST00000375850 PRR20EP86478 221 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 PRR20CP86479 221 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 PRR20DP86480 221 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 PRR20BP86481 221 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 PRR20AP86496 221 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 TRIM16LQ309B1 348 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 FAM219AQ8IW50 185 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 C15orf40Q8WUR7 153 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 KRTAP17-1Q9BYP8 105 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 COPZ2Q9P299 210 aa16.86■□□□□ 0.29
C9orf47-202ENST00000375850 TNFAIP8O95379 198 aa16.85■□□□□ 0.29
C9orf47-202ENST00000375850 GIG44P09565 113 aaPredicted RBP16.85■□□□□ 0.29
C9orf47-202ENST00000375850 ETV6P41212 452 aa16.85■□□□□ 0.29
C9orf47-202ENST00000375850 BSXQ3C1V8 233 aa16.85■□□□□ 0.29
C9orf47-202ENST00000375850 MZT2AQ6P582 158 aa16.85■□□□□ 0.29
C9orf47-202ENST00000375850 DCANP1Q8TF63 244 aa16.85■□□□□ 0.29
C9orf47-202ENST00000375850 FNDC4Q9H6D8 234 aaPredicted RBP16.85■□□□□ 0.29
C9orf47-202ENST00000375850 PI3P19957 117 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 UCP1P25874 307 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 HLA-DMBP28068 263 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 HTR2BP41595 481 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 RORCP51449 518 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 SPCS3P61009 180 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 AARDQ4LEZ3 155 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 OR52E5Q8NH55 327 aa16.84■□□□□ 0.29
C9orf47-202ENST00000375850 RNASE11Q8TAA1 199 aaKnown RBP16.84■□□□□ 0.29
C9orf47-202ENST00000375850 HPGDSO60760 199 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 ZNF688P0C7X2 276 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 RBMY1A1P0DJD3 496 aaKnown RBP16.83■□□□□ 0.28
C9orf47-202ENST00000375850 RBMY1CP0DJD4 496 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 SLC25A4P12235 298 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 RBMY1FQ15415 496 aaKnown RBP16.83■□□□□ 0.28
C9orf47-202ENST00000375850 OR1S2Q8NGQ3 325 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 TERB2Q8NHR7 220 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 AP3S1Q92572 193 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 C1QTNF4Q9BXJ3 329 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 KLK11Q9UBX7 282 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 TBC1D24Q9ULP9 559 aa16.83■□□□□ 0.28
C9orf47-202ENST00000375850 DNAH10Q8IVF4 4471 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 FAM25AB3EWG3 89 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 FAM25CB3EWG5 89 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 FAM25GB3EWG6 89 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 IGKV1-17P01599 117 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 CD3DP04234 171 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 PPP5CP53041 499 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 NUTF2P61970 127 aaKnown RBP16.82■□□□□ 0.28
C9orf47-202ENST00000375850 NCS1P62166 190 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 Q8WTZ3 238 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 RNF126Q9BV68 326 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 FUNDC2Q9BWH2 189 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 SEPSECSQ9HD40 501 aaKnown RBP16.82■□□□□ 0.28
C9orf47-202ENST00000375850 MTFP1Q9UDX5 166 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 CACFD1Q9UGQ2 172 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 U3KQE9 123 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 X6R8D5 127 aa16.82■□□□□ 0.28
C9orf47-202ENST00000375850 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
C9orf47-202ENST00000375850 LINC00336Q6ZUF6 198 aa16.81■□□□□ 0.28
C9orf47-202ENST00000375850 RNASEH2CQ8TDP1 164 aaKnown RBP16.81■□□□□ 0.28
C9orf47-202ENST00000375850 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
C9orf47-202ENST00000375850 MRPL36Q9P0J6 103 aaKnown RBP16.81■□□□□ 0.28
C9orf47-202ENST00000375850 HERC2O95714 4834 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 KNCNA6PVL3 124 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 HNRNPCP07910 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
C9orf47-202ENST00000375850 C4BPBP20851 252 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 YPEL3P61236 119 aaPredicted RBP16.8■□□□□ 0.28
C9orf47-202ENST00000375850 VBP1P61758 197 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 DHRS2Q13268 280 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 Q6ZTC4 211 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 ABHD1Q96SE0 405 aa16.8■□□□□ 0.28
C9orf47-202ENST00000375850 IGHV4-4A0A075B6R2 117 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 CDS2O95674 445 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 CD74P04233 296 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 TAS2R19P59542 299 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 SNRPD3P62318 126 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms