RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 NUDT3O95989 172 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 PSMB2P49721 201 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 FOXL2NBQ6ZUU3 175 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 DOCK10Q96BY6 2186 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 GGTLC1Q9BX51 225 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 TMEM106BQ9NUM4 274 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 AP5S1Q9NUS5 200 aa5.42□□□□□ -1.54
SMC1A-202ENST00000375340 IGHV1-69-2A0A0G2JMI3 117 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 M0QZ24 198 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 TEX45Q8NA69 505 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 OR52E5Q8NH55 327 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 CD24P25063 80 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 FXYD7P58549 80 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 SFXN3Q9BWM7 321 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 SELENOKQ9Y6D0 94 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 NTN3O00634 580 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 PAX9P55771 341 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 DMRTC2Q8IXT2 367 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 CLEC7AQ9BXN2 247 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 USF3Q68DE3 2245 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 J3QR89 54 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 RBPMS2Q6ZRY4 209 aaKnown RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 C1orf174Q8IYL3 243 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 ALKBH7Q9BT30 221 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 RABAC1Q9UI14 185 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 SPTAN1Q13813 2472 aaKnown RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 IGHV2-70P01814 119 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 PSG9Q00887 426 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 C16orf92Q96LL3 132 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 IGKV3D-15A0A087WSY6 115 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 ZNF324O75467 553 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 POLR3KQ9Y2Y1 108 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 NUTF2P61970 127 aaKnown RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 SELENOTP62341 195 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-202ENST00000375340 COQ2Q96H96 371 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 OR2T8A6NH00 312 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 TMEM50AO95807 157 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 IGKV1D-33P01593 117 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 IGKV1-33P01594 117 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 MC5RP33032 325 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 CX3CL1P78423 397 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 TMEM14EPQ6UXP3 125 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 OR10AG1Q8NH19 301 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 C19orf24Q9BVV8 132 aa5.41□□□□□ -1.54
SMC1A-202ENST00000375340 PCNX3Q9H6A9 2034 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 CEP192Q8TEP8 1941 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 TRBV24-1A0A075B6N3 115 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 C15orf62A8K5M9 175 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 YPEL1O60688 119 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 C10orf55Q5SWW7 151 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 ASCL4Q6XD76 172 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 TMEM186Q96B77 213 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 YPEL2Q96QA6 119 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 MAP1LC3AQ9H492 121 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 SRSF9Q13242 221 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMC1A-202ENST00000375340 RSPO1Q2MKA7 263 aaPredicted RBP5.4□□□□□ -1.54
SMC1A-202ENST00000375340 IGKV1-39P01597 117 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 IGKV1D-39P04432 117 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 FABP2P12104 132 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 WDR86Q86TI4 376 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 ZNF502Q8TBZ5 544 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 GNB1LQ9BYB4 327 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 RALYQ9UKM9 306 aaKnown RBP5.4□□□□□ -1.54
SMC1A-202ENST00000375340 ZNF585BQ52M93 769 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 OR10J3Q5JRS4 329 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 NIT1Q86X76 327 aa5.4□□□□□ -1.54
SMC1A-202ENST00000375340 LYNX1G3V0Z9 82 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 NBEAP1P0C6P0 100 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 LYNX1P0DP58 116 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 C12orf54Q6X4T0 127 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 PRELID3AQ96N28 172 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 HIST1H4GQ99525 98 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 MCRIP2Q9BUT9 160 aaKnown RBP5.4□□□□□ -1.55
SMC1A-202ENST00000375340 EML6Q6ZMW3 1958 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 J3QW42 95 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 MLNRO43193 412 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 UNQ5815/PRO19632Q6UWF5 114 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 ZNF124Q15973 351 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 LCN12Q6JVE5 192 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 TMEM136Q6ZRR5 245 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 METTL26Q96S19 204 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 TMEM160Q9NX00 188 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 LAMTOR2Q9Y2Q5 125 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 PLCE1Q9P212 2302 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 EVI2AP22794 236 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 HAPLN4Q86UW8 402 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 NUDT10Q8NFP7 164 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 NUDT11Q96G61 164 aa5.4□□□□□ -1.55
SMC1A-202ENST00000375340 IGHV2-5P01817 119 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 RIPPLY3P57055 190 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 FNDC4Q9H6D8 234 aaPredicted RBP5.39□□□□□ -1.55
SMC1A-202ENST00000375340 TRAV9-1A0A075B6T8 112 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 LEPP41159 167 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 PLP1P60201 277 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 LY6EQ16553 131 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 C2orf83Q53S99 150 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 UNQ6494/PRO21346Q6UXR6 183 aa5.39□□□□□ -1.55
SMC1A-202ENST00000375340 hDV102S1A0JD36 115 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms