RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CUBNO60494 3623 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 FAM223BA6NKX1 122 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 FCGR2BP31994 310 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 RHOGP84095 191 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 FAM223AQ8IWN6 122 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 THAP8Q8NA92 274 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 VN1R17PQ8TDU5 208 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 TAF15Q92804 592 aaKnown RBP eCLIP13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 NPVFQ9HCQ7 196 aa13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
HLA-DMA-201ENST00000374843 OR2J3O76001 311 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 NDUFB8O95169 186 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 FGF7P21781 194 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 AKR1C1Q04828 323 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 MLANAQ16655 118 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 CENPVQ7Z7K6 275 aaPredicted RBP13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 RNF152Q8N8N0 203 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 OR4X1Q8NH49 305 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 GNPNAT1Q96EK6 184 aaPredicted RBP13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 FBXL7Q9UJT9 491 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 TIMM9Q9Y5J7 89 aa13.43□□□□□ -0.26
HLA-DMA-201ENST00000374843 SMCO3A2RU48 225 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 MFSD2BA6NFX1 497 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 CFDP00746 253 aaPredicted RBP13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 CRYBA1P05813 215 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 SPP1P10451 314 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 PSMB8P28062 276 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 RND2P52198 227 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 SLC35B1P78383 322 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 IFITM2Q01629 132 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 MYOZ3Q8TDC0 251 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 SCARB1Q8WTV0 552 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 ATP6V0BQ99437 205 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 NPCDR1Q9BY65 106 aa13.42□□□□□ -0.26
HLA-DMA-201ENST00000374843 IGKV1OR2-108A0A075B7D4 117 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 RUNX1Q01196 453 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 FOXE3Q13461 319 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 C15orf32Q32M92 178 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 TEPPQ6URK8 271 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 COMMD1Q8N668 190 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 HSD17B11Q8NBQ5 300 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 WIPF2Q8TF74 440 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 ACY3Q96HD9 319 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 USMG5Q96IX5 58 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 CXorf58Q96LI9 332 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 MGST2Q99735 147 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 GGTLC1Q9BX51 225 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 C21orf62Q9NYP8 219 aa13.41□□□□□ -0.26
HLA-DMA-201ENST00000374843 IGKV1D-37A0A075B6S9 117 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 PSMB11A5LHX3 300 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 RGS13O14921 159 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 TRGV3P03979 118 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 ELANEP08246 267 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 EIF5AL1Q6IS14 154 aaKnown RBP13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 OR2G3Q8NGZ4 309 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 ZNF502Q8TBZ5 544 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 TXN2Q99757 166 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 SH3BGRL3Q9H299 93 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 KCNIP2Q9NS61 270 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
HLA-DMA-201ENST00000374843 NF1P21359 2839 aa13.4□□□□□ -0.27
HLA-DMA-201ENST00000374843 IGHV3-21A0A0B4J1V1 117 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 CLN5O75503 358 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 IGHV3-48P01763 117 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 IGLC1P0CG04 106 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 MFAP4P55083 255 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 TPPP2P59282 170 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 DEFA5Q01523 94 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 ACSM6Q6P461 480 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 ZNF329Q86UD4 541 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 ZNF680Q8NEM1 530 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 MS4A10Q96PG2 267 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 TRGV9Q99603 122 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 RSG1Q9BU20 258 aa13.39□□□□□ -0.27
HLA-DMA-201ENST00000374843 AGPAT2O15120 278 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 IFNA7P01567 189 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 PF4V1P10720 104 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 NPBWR1P48145 328 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 CAMLGP49069 296 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 RAB9AP51151 201 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 RAB31Q13636 194 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 ZNF767PQ75MW2 155 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 TMED6Q8WW62 240 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 CCDC140Q96MF4 163 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 KLK15Q9H2R5 256 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 SLC45A2Q9UMX9 530 aa13.38□□□□□ -0.27
HLA-DMA-201ENST00000374843 TRBV7-1A0A0A6YYK4 115 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms