RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PRB3Q04118 309 aaPredicted RBP10.02□□□□□ -0.8
NCDN-202ENST00000373243 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.8
NCDN-202ENST00000373243 WDR82Q6UXN9 313 aa10.02□□□□□ -0.8
NCDN-202ENST00000373243 RCHY1Q96PM5 261 aa10.02□□□□□ -0.8
NCDN-202ENST00000373243 FRMD6-AS1P0C7T7 363 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 ZCCHC24Q8N2G6 241 aaKnown RBP10.02□□□□□ -0.81
NCDN-202ENST00000373243 PNKDQ8N490 385 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 DEFB124Q8NES8 71 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 COQ2Q96H96 371 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 HARBI1Q96MB7 349 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 CLEC7AQ9BXN2 247 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 PLXNB1O43157 2135 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 A0A087X0K7 114 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 H3BUT2 72 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 FOXH1O75593 365 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 VENTXO95231 258 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.81
NCDN-202ENST00000373243 REG1AP05451 166 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 NABP2Q9BQ15 211 aa10.02□□□□□ -0.81
NCDN-202ENST00000373243 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 TRAV17A0A0B4J275 112 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 A0A1W2PRD5 423 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 A0A1W2PRF3 423 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 A0A1W2PRM7 423 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 G3V4G9 280 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 TIMP3P35625 211 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 LINC00310P59036 64 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 PMCHL1Q16048 86 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 KRTCAP3Q53RY4 240 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 Q6ZS49 121 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 BHLHA15Q7RTS1 189 aaPredicted RBP10.01□□□□□ -0.81
NCDN-202ENST00000373243 HES4Q9HCC6 221 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 WDR83OSQ9Y284 106 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.01□□□□□ -0.81
NCDN-202ENST00000373243 VSTM5A8MXK1 200 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 CNIH1O95406 144 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 FDCSPQ8NFU4 85 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 ZGRF1Q86YA3 2104 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 TMEM265A0A087WTH1 108 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 PPIAL4CA0A0B4J2A2 164 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 MLNRO43193 412 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
NCDN-202ENST00000373243 PPIAL4GP0DN37 164 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 HSPE1P61604 102 aaKnown RBP10.01□□□□□ -0.81
NCDN-202ENST00000373243 MLANAQ16655 118 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 ACSF3Q4G176 576 aaPredicted RBP10.01□□□□□ -0.81
NCDN-202ENST00000373243 HCP5Q6MZN7 132 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 MOB3BQ86TA1 216 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 KCNS1Q96KK3 526 aa10.01□□□□□ -0.81
NCDN-202ENST00000373243 CEP295Q9C0D2 2601 aa10□□□□□ -0.81
NCDN-202ENST00000373243 IBA57Q5T440 356 aaKnown RBP10□□□□□ -0.81
NCDN-202ENST00000373243 MUC15Q8N387 334 aa10□□□□□ -0.81
NCDN-202ENST00000373243 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
NCDN-202ENST00000373243 FAM231BA6NCW3 169 aa10□□□□□ -0.81
NCDN-202ENST00000373243 C15orf62A8K5M9 175 aa10□□□□□ -0.81
NCDN-202ENST00000373243 SRSF6Q13247 344 aaKnown RBP10□□□□□ -0.81
NCDN-202ENST00000373243 ZNF146Q15072 292 aa10□□□□□ -0.81
NCDN-202ENST00000373243 SLC25A34Q6PIV7 304 aa10□□□□□ -0.81
NCDN-202ENST00000373243 ZADH2Q8N4Q0 377 aa10□□□□□ -0.81
NCDN-202ENST00000373243 GP6Q9HCN6 339 aa10□□□□□ -0.81
NCDN-202ENST00000373243 TMEM167BQ9NRX6 74 aa10□□□□□ -0.81
NCDN-202ENST00000373243 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
NCDN-202ENST00000373243 A0A1W2PS18 150 aa10□□□□□ -0.81
NCDN-202ENST00000373243 hDV102S1A0JD36 115 aa10□□□□□ -0.81
NCDN-202ENST00000373243 MPDU1O75352 247 aa10□□□□□ -0.81
NCDN-202ENST00000373243 APOBEC3AP31941 199 aaPredicted RBP10□□□□□ -0.81
NCDN-202ENST00000373243 DUTP33316 252 aaKnown RBP10□□□□□ -0.81
NCDN-202ENST00000373243 PRSS57Q6UWY2 283 aa10□□□□□ -0.81
NCDN-202ENST00000373243 PERPQ96FX8 193 aa10□□□□□ -0.81
NCDN-202ENST00000373243 ZNF355PQ9NSJ1 428 aa10□□□□□ -0.81
NCDN-202ENST00000373243 ZNRD1Q9P1U0 126 aa10□□□□□ -0.81
NCDN-202ENST00000373243 CHEK1O14757 476 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 LINC00869P0C866 280 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 Q6ZT83 130 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 FAM216BQ8N7L0 139 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 GGTLC1Q9BX51 225 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 FOXA3P55318 350 aaPredicted RBP9.99□□□□□ -0.81
NCDN-202ENST00000373243 TRIP6Q15654 476 aaKnown RBP9.99□□□□□ -0.81
NCDN-202ENST00000373243 SRSF7Q16629 238 aaKnown RBP eCLIP9.99□□□□□ -0.81
NCDN-202ENST00000373243 C9orf106Q8NAJ2 232 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 OR4A5Q8NH83 315 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 HILPDAQ9Y5L2 63 aa9.99□□□□□ -0.81
NCDN-202ENST00000373243 APCSP02743 223 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 CLEC3BP05452 202 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 WNT2P09544 360 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 TMEM95Q3KNT9 176 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 BVES-AS1Q5T3Y7 98 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 OR2T6Q8NHC8 308 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 AGMATQ9BSE5 352 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 A6NJY4 79 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 IQCF6A8MYZ5 107 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 COL8A2P25067 703 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 GPR6P46095 362 aaPredicted RBP9.98□□□□□ -0.81
NCDN-202ENST00000373243 EFNB3Q15768 340 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 OR9G1Q8NH87 305 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
NCDN-202ENST00000373243 SUB1P53999 127 aaKnown RBP eCLIP9.98□□□□□ -0.813e-7■■■□□ 18.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms