RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 JPT1Q9UK76 154 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 INTS1Q8N201 2190 aaKnown RBP11.2□□□□□ -0.62
USP49-201ENST00000373006 TRGV8A0A0C4DH27 118 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 IGHV2-70DA0A0C4DH43 119 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
USP49-201ENST00000373006 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 GNG7O60262 68 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 RPL8P62917 257 aaKnown RBP11.2□□□□□ -0.62
USP49-201ENST00000373006 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 OR51B2Q9Y5P1 312 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 DMXL2Q8TDJ6 3036 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 SH2D7A6NKC9 451 aaPredicted RBP11.2□□□□□ -0.62
USP49-201ENST00000373006 J3QR06 171 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 SAA2P0DJI9 122 aaPredicted RBP11.2□□□□□ -0.62
USP49-201ENST00000373006 CAMPP49913 170 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 CT45A1Q5HYN5 189 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 FAM201AQ5SY85 155 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 EBLN2Q6P2I7 272 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 SPACA3Q8IXA5 215 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 UBALD2Q8IYN6 164 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 CT45A3Q8NHU0 189 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
USP49-201ENST00000373006 TMEM265A0A087WTH1 108 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 CA7P43166 264 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 TMEM164Q5U3C3 297 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 DDB2Q92466 427 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 KLF13Q9Y2Y9 288 aaPredicted RBP11.19□□□□□ -0.62
USP49-201ENST00000373006 PKDREJQ9NTG1 2253 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 A0A1W2PN81 502 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 M0R2Z0 102 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 APOA2P02652 100 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 KIR3DL3Q8N743 410 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 SARAFQ96BY9 339 aa11.19□□□□□ -0.62
USP49-201ENST00000373006 SLC25A10Q9UBX3 287 aaPredicted RBP11.19□□□□□ -0.62
USP49-201ENST00000373006 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 GAGE12BA1L429 117 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 IZUMO1RA6ND01 250 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 K7EP13 123 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 IGLL1P15814 213 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 INO80CQ6PI98 192 aaPredicted RBP11.18□□□□□ -0.62
USP49-201ENST00000373006 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 C19orf35Q6ZS72 473 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 IGF2BP2-AS1Q96M15 143 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 IGHV3-48P01763 117 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 CECR9P0C854 216 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 CD24P25063 80 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 CORO2AQ92828 525 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 TRIB1Q96RU8 372 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 CALYQ9NYX4 217 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
USP49-201ENST00000373006 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
USP49-201ENST00000373006 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 PYYP10082 97 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 K7ERU9 68 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 MGST3O14880 152 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 MMP23AO75900 390 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 COX19Q49B96 90 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 VWA1Q6PCB0 445 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 DUX4L9Q6RFH8 374 aaPredicted RBP11.17□□□□□ -0.62
USP49-201ENST00000373006 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 SLC25A33Q9BSK2 321 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 SPRY4Q9C004 299 aa11.17□□□□□ -0.62
USP49-201ENST00000373006 GSX1Q9H4S2 264 aaPredicted RBP11.17□□□□□ -0.62
USP49-201ENST00000373006 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
USP49-201ENST00000373006 BMI1P35226 326 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 UBE2L3P68036 154 aaKnown RBP11.16□□□□□ -0.62
USP49-201ENST00000373006 MDS2Q8NDY4 140 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 NUP35Q8NFH5 326 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 OR2T6Q8NHC8 308 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 A0A087X0K7 114 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 SRRM4A7MD48 611 aaKnown RBP11.16□□□□□ -0.62
USP49-201ENST00000373006 CORTO00230 105 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 TAS2R45P59539 299 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 Q6ZT83 130 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 GCSAMQ8N6F7 178 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 SNRNP40Q96DI7 357 aaKnown RBP11.16□□□□□ -0.62
USP49-201ENST00000373006 TRAV9-2A0A087WT02 112 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 IGKV3-15P01624 115 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 REG1AP05451 166 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 TNFRSF19Q9NS68 423 aa11.16□□□□□ -0.62
USP49-201ENST00000373006 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
USP49-201ENST00000373006 PPIAL4DF5H284 164 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 ACP1P24666 158 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 RAB37Q96AX2 223 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.62
USP49-201ENST00000373006 IGHV2-26A0A0B4J1V2 119 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms