RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 IGHV1-3A0A0C4DH29 117 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 SLC25A17O43808 307 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 DEFA4P12838 97 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 ERHP84090 104 aaKnown RBP12.79□□□□□ -0.36
C9orf78-201ENST00000372447 RAB31Q13636 194 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 MIC13Q5XKP0 118 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 NIPSNAP3BQ9BS92 247 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 E7EUB6 86 aa12.78□□□□□ -0.36
C9orf78-201ENST00000372447 PAX6P26367 422 aa12.78□□□□□ -0.36
C9orf78-201ENST00000372447 HTR1DP28221 377 aa12.78□□□□□ -0.36
C9orf78-201ENST00000372447 TAGLN2P37802 199 aaKnown RBP12.78□□□□□ -0.36
C9orf78-201ENST00000372447 FAM90A2PQ658T7 463 aa12.78□□□□□ -0.36
C9orf78-201ENST00000372447 LURAP1LQ8IV03 231 aa12.78□□□□□ -0.36
C9orf78-201ENST00000372447 MANBALQ9NQG1 85 aa12.78□□□□□ -0.36
C9orf78-201ENST00000372447 TBL2Q9Y4P3 447 aaKnown RBP12.78□□□□□ -0.36
C9orf78-201ENST00000372447 MDFIC2A0A1B0GVS7 189 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 A0A1W2PPV4 95 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 PSMB3P49720 205 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 B2MP61769 119 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.36
C9orf78-201ENST00000372447 DEFB112Q30KQ8 113 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 SLC35E3Q7Z769 313 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 MOB3BQ86TA1 216 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 DYNAPQ8N1N2 210 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 C15orf54Q8N8G6 183 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 TEX45Q8NA69 505 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 SSMEM1Q8WWF3 244 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 RPEQ96AT9 228 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 ZNF48Q96MX3 618 aaPredicted RBP12.77□□□□□ -0.36
C9orf78-201ENST00000372447 TUBA4BQ9H853 241 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 DPM3Q9P2X0 92 aa12.77□□□□□ -0.36
C9orf78-201ENST00000372447 CGB1A6NKQ9 187 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 COLCA2A8K830 154 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 RPL29P47914 159 aaKnown RBP12.76□□□□□ -0.37
C9orf78-201ENST00000372447 CD81P60033 236 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 SSX2Q16385 188 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 MINOS1Q5TGZ0 78 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 TPSG1Q9NRR2 321 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 HILPDAQ9Y5L2 63 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 MINOS1-NBL1R4GNA1 71 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 C10orf55Q5SWW7 151 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 TMEM144Q7Z5S9 345 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 IQCF2Q8IXL9 164 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 STPG3Q8N7X2 389 aa12.76□□□□□ -0.37
C9orf78-201ENST00000372447 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
C9orf78-201ENST00000372447 CRYGBP07316 175 aa12.75□□□□□ -0.37
C9orf78-201ENST00000372447 WT1-ASQ06250 92 aa12.75□□□□□ -0.37
C9orf78-201ENST00000372447 CD69Q07108 199 aa12.75□□□□□ -0.37
C9orf78-201ENST00000372447 GATAD1Q8WUU5 269 aa12.75□□□□□ -0.37
C9orf78-201ENST00000372447 PRDM13Q9H4Q3 707 aa12.75□□□□□ -0.37
C9orf78-201ENST00000372447 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
C9orf78-201ENST00000372447 PRR20EP86478 221 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 PRR20CP86479 221 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 PRR20DP86480 221 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 PRR20BP86481 221 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 PRR20AP86496 221 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 GAMTQ14353 236 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 PRSS8Q16651 343 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 TPTE2P1Q5T6R2 138 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 MMD2Q8IY49 270 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 CNTFRP26992 372 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 GPX4P36969 197 aaPredicted RBP12.74□□□□□ -0.37
C9orf78-201ENST00000372447 CEACAM3P40198 252 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 SUB1P53999 127 aaKnown RBP eCLIP12.74□□□□□ -0.37
C9orf78-201ENST00000372447 PSG5Q15238 335 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 MLANAQ16655 118 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 SIGLECL1Q8N7X8 197 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 SLC45A2Q9UMX9 530 aa12.74□□□□□ -0.37
C9orf78-201ENST00000372447 TNCP24821 2201 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 A0A087WWC5 75 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 A0A1W2PPI3 338 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 TMEM250H0YL14 139 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 PAGE4O60829 102 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 LINC00869P0C866 280 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 STAG3L2P0CL84 134 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 STAG3L3P0CL85 134 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 SLC16A13Q7RTY0 426 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 RNASEH2CQ8TDP1 164 aaKnown RBP12.73□□□□□ -0.37
C9orf78-201ENST00000372447 ISOC2Q96AB3 205 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 SIGLEC9Q9Y336 463 aa12.73□□□□□ -0.37
C9orf78-201ENST00000372447 IGKV1OR2-108A0A075B7D4 117 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 ACTL6BO94805 426 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 MAS1LP35410 378 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 RHOBP62745 196 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 PNRC1Q12796 327 aaPredicted RBP12.72□□□□□ -0.37
C9orf78-201ENST00000372447 Q6YL49 198 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 OR4F5Q8NH21 305 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 ABHD5Q8WTS1 349 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 OR4F4Q96R69 305 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 RNF5Q99942 180 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 JMJD1CQ15652 2540 aa12.72□□□□□ -0.37
C9orf78-201ENST00000372447 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
C9orf78-201ENST00000372447 B4DEV8 164 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms