RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ZNF503Q96F45 646 aa14.58□□□□□ -0.08
CD40-201ENST00000372276 TRGV9Q99603 122 aa14.58□□□□□ -0.08
CD40-201ENST00000372276 INSIG2Q9Y5U4 225 aa14.58□□□□□ -0.08
CD40-201ENST00000372276 CFAP47Q6ZTR5 3102 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 ISLRO14498 428 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 ENSAO43768 121 aaKnown RBP14.57□□□□□ -0.08
CD40-201ENST00000372276 AMBPP02760 352 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 MT-ND6P03923 174 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 CRYGCP07315 174 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 CRYBB3P26998 211 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 ERVFC1-1P60608 527 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 WDR73Q6P4I2 378 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 MOB3BQ86TA1 216 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 OR2T6Q8NHC8 308 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 CHRDL1Q9BU40 450 aa14.57□□□□□ -0.08
CD40-201ENST00000372276 CGB1A6NKQ9 187 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 CRYGBP07316 175 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 PKIAP61925 76 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 UBE2L3P68036 154 aaKnown RBP14.56□□□□□ -0.08
CD40-201ENST00000372276 KLRB1Q12918 225 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 CLEC12BQ2HXU8 276 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 ZNF672Q499Z4 452 aaPredicted RBP14.56□□□□□ -0.08
CD40-201ENST00000372276 CENPWQ5EE01 88 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 OR8B3Q8NGG8 313 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 NPIPB3Q92617 1050 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 PERPQ96FX8 193 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 FAM167A-AS1Q96KT0 104 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 OR8B2Q96RD0 313 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 PAXXQ9BUH6 204 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 RAB1BQ9H0U4 201 aa14.56□□□□□ -0.08
CD40-201ENST00000372276 AURKAIP1Q9NWT8 199 aaPredicted RBP14.56□□□□□ -0.08
CD40-201ENST00000372276 PGPEP1LA6NFU8 196 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 TSTD3H0UI37 97 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 BUB1B-PAK6H3BSN5 160 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 K7EN84 100 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 SUMO1P63165 101 aaKnown RBP14.55□□□□□ -0.08
CD40-201ENST00000372276 MLANAQ16655 118 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 SLC25A2Q9BXI2 301 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 CDC42EP3Q9UKI2 254 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 ARFGEF3Q5TH69 2177 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 PKD1L2Q7Z442 2459 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 PPIAL4CA0A0B4J2A2 164 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 A0A1W2PPI3 338 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 GATCO43716 136 aaKnown RBP14.55□□□□□ -0.08
CD40-201ENST00000372276 FAM87AP0C7U9 286 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 PPIAL4GP0DN37 164 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 LGALS4P56470 323 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 ZNF841Q6ZN19 808 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 TMEM116Q8NCL8 245 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 OR5AU1Q8NGC0 362 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 SMIM12Q96EX1 92 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 GNB1LQ9BYB4 327 aa14.55□□□□□ -0.08
CD40-201ENST00000372276 FNDC4Q9H6D8 234 aaPredicted RBP14.55□□□□□ -0.08
CD40-201ENST00000372276 IGHV1-3A0A0C4DH29 117 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 IGLC7A0M8Q6 106 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 E7EUB6 86 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 LOC400499M0QZD8 3231 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 GATA2P23769 480 aaPredicted RBP14.54□□□□□ -0.08
CD40-201ENST00000372276 DIAPH2-AS1Q14236 149 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 TIMD4Q96H15 378 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 SIGLEC9Q9Y336 463 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 V9GYV3 84 aa14.54□□□□□ -0.08
CD40-201ENST00000372276 DSPP15924 2871 aaKnown RBP14.54□□□□□ -0.08
CD40-201ENST00000372276 GGTLC3B5MD39 225 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 CCL21O00585 134 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 LIPFP07098 398 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 GBGT1Q8N5D6 347 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 OR1L6Q8NGR2 347 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 RPEQ96AT9 228 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 TNFRSF19Q9NS68 423 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 ZNF355PQ9NSJ1 428 aa14.53□□□□□ -0.08
CD40-201ENST00000372276 IGKV1D-37A0A075B6S9 117 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 PLP1P60201 277 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 PAFAH1B2P68402 229 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 TNXAQ16473 311 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 MRGPRG-AS1Q2M3A8 158 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 PPP1R27Q86WC6 154 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 LY6G5BQ8NDX9 201 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 NEU4Q8WWR8 484 aaPredicted RBP14.52□□□□□ -0.08
CD40-201ENST00000372276 PRDM13Q9H4Q3 707 aa14.52□□□□□ -0.08
CD40-201ENST00000372276 COL8A2P25067 703 aa14.52□□□□□ -0.09
CD40-201ENST00000372276 FAM231DQ6ZW35 169 aa14.52□□□□□ -0.09
CD40-201ENST00000372276 LINC01560Q8TB33 94 aa14.52□□□□□ -0.09
CD40-201ENST00000372276 PRORYQ9H606 182 aa14.52□□□□□ -0.09
CD40-201ENST00000372276 PTPRQQ9UMZ3 2332 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 FAM90A27PA6NNH2 459 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 HNF1AP20823 631 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 CEACAM3P40198 252 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 CX3CL1P78423 397 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 IQCJQ1A5X6 159 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 C10orf55Q5SWW7 151 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 RASL11AQ6T310 242 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 IGF2BP2-AS1Q96M15 143 aa14.51□□□□□ -0.09
CD40-201ENST00000372276 F11RQ9Y624 299 aaKnown RBP14.51□□□□□ -0.09
CD40-201ENST00000372276 KMT2BQ9UMN6 2715 aaPredicted RBP14.5□□□□□ -0.09
CD40-201ENST00000372276 HYPMO75409 117 aa14.5□□□□□ -0.09
CD40-201ENST00000372276 GZMBP10144 247 aa14.5□□□□□ -0.09
CD40-201ENST00000372276 ESDP10768 282 aa14.5□□□□□ -0.09
CD40-201ENST00000372276 RANP62826 216 aaKnown RBP14.5□□□□□ -0.09
CD40-201ENST00000372276 DEFA6Q01524 100 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms