RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RND3P61587 244 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 ZNF497Q6ZNH5 498 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 KCNS1Q96KK3 526 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 SLC17A3O00476 420 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 HOXA5P20719 270 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 LEPP41159 167 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 EFNA4P52798 201 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 FOXG1P55316 489 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-202ENST00000372216 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 SCN8AQ9UQD0 1980 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 RNF223E7ERA6 249 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 M0QZK8 103 aa8.15□□□□□ -1.1
COL4A6-202ENST00000372216 OR10AG1Q8NH19 301 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 SHISA3A0PJX4 238 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 INS-IGF2F8WCM5 200 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 INSP01308 110 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 APOHP02749 345 aaPredicted RBP8.15□□□□□ -1.11
COL4A6-202ENST00000372216 C20orf204Q6ZNR8 217 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 DOCK6Q96HP0 2047 aa8.15□□□□□ -1.11
COL4A6-202ENST00000372216 ATP5LO75964 103 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 LY6HO94772 140 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 CKS1BP61024 79 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 RHOGP84095 191 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 BMPERQ8N8U9 685 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 YPEL1O60688 119 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 MORN2Q502X0 79 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF660Q6AZW8 331 aaPredicted RBP8.14□□□□□ -1.11
COL4A6-202ENST00000372216 GTF3AQ92664 365 aaKnown RBP8.14□□□□□ -1.11
COL4A6-202ENST00000372216 YPEL2Q96QA6 119 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 CDC42EP3Q9UKI2 254 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 TRGV1A0A0A0MS02 117 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 RTBDNQ9BSG5 229 aaPredicted RBP8.14□□□□□ -1.11
COL4A6-202ENST00000372216 TMEM8BA6NDV4 472 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 CD28P10747 220 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF250P15622 560 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 CCL1P22362 96 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 GATD1Q8NB37 220 aa8.14□□□□□ -1.11
COL4A6-202ENST00000372216 SCO2A0A1W2PP80 73 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 DEFB130BP0DP73 79 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 DEFB130AP0DP74 79 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 ANXA2RQ3ZCQ2 193 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 PAQR4Q8N4S7 273 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-202ENST00000372216 GZMBP10144 247 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 FHITP49789 147 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 SP5Q6BEB4 398 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-202ENST00000372216 GATAD1Q8WUU5 269 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 ASCL2Q99929 193 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 Q9H3A6 140 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 A0A087WV48 116 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 UPK2O00526 184 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 PMCHL1Q16048 86 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 TRAF4Q9BUZ4 470 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-202ENST00000372216 SLC25A15Q9Y619 301 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 KNTC1P50748 2209 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 A0A087WX48 190 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 TMEM50AO95807 157 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 Q96MF0 132 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 TRBV6-7A0A0A0MS04 114 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 C1QTNF9BB2RNN3 333 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 TIMM23O14925 209 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 WNT2P09544 360 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 MST1P26927 711 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 MIR17HGQ75NE6 70 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 CXorf65A6NEN9 183 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 CA7P43166 264 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 PMCHL2Q9BQD1 86 aa8.13□□□□□ -1.11
COL4A6-202ENST00000372216 PLXNA3P51805 1871 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 RLFQ13129 1914 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 CBLN1P23435 193 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 RPL15P61313 204 aaKnown RBP8.12□□□□□ -1.11
COL4A6-202ENST00000372216 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 FAM169BQ8N8A8 192 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 EDA2RQ9HAV5 297 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF319Q9P2F9 582 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 TICRRQ7Z2Z1 1910 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 IGKV1-9A0A0C4DH69 117 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 SMIM13P0DJ93 91 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 CRYGSP22914 178 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 PAX2Q02962 417 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 VWA8A3KMH1 1905 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 DANCRP0C864 163 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 NABP1Q96AH0 204 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF414Q96IQ9 312 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 RUSC1-AS1Q66K80 236 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 K7ENP7 123 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 HBDP02042 147 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 UCP1P25874 307 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 GAS1P54826 345 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 PRR30Q53SZ7 412 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-202ENST00000372216 IGFL4Q6B9Z1 124 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 VCX2Q9H322 139 aa8.12□□□□□ -1.11
COL4A6-202ENST00000372216 SEPSECSQ9HD40 501 aaKnown RBP8.12□□□□□ -1.11
COL4A6-202ENST00000372216 TRIOBPQ9H2D6 2365 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms