RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF835Q9Y2P0 537 aa9.51□□□□□ -0.89
PDE6C-201ENST00000371447 MDFIC2A0A1B0GVS7 189 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 STAG3L2P0CL84 134 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 STAG3L3P0CL85 134 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 ZNF25P17030 456 aaPredicted RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 C3orf36Q3SXR2 165 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 ZNF672Q499Z4 452 aaPredicted RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 OR2T10Q8NGZ9 312 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 RPEQ96AT9 228 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 FNDC4Q9H6D8 234 aaPredicted RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 FLNCQ14315 2725 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 UTP20O75691 2785 aaKnown RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 USP9YO00507 2555 aaPredicted RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 TRAV34A0A0B4J273 112 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 MPDU1O75352 247 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 CNIH1O95406 144 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 HLA-DRB5Q30154 266 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 CORO2AQ92828 525 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 GAR1Q9NY12 217 aaKnown RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 JKAMPQ9P055 326 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 WASHC3Q9Y3C0 194 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 MSRB2Q9Y3D2 182 aa9.5□□□□□ -0.89
PDE6C-201ENST00000371447 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
PDE6C-201ENST00000371447 PPOXP50336 477 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 MEF2CQ06413 473 aaPredicted RBP9.49□□□□□ -0.89
PDE6C-201ENST00000371447 PRR27Q6MZM9 219 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 ZNF833PQ6ZTB9 187 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 OR1B1Q8NGR6 318 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 IMMP2LQ96T52 175 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 CSPG4Q6UVK1 2322 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 B9A039 149 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 FCN1O00602 326 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 FRMD6-AS1P0C7T7 363 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 ERVFC1-1P60608 527 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 RAB4BP61018 213 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 TMEM133Q9H2Q1 129 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 IGHV2-26A0A0B4J1V2 119 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 COX7A2P2O60397 106 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
PDE6C-201ENST00000371447 UBE2L3P68036 154 aaKnown RBP9.49□□□□□ -0.89
PDE6C-201ENST00000371447 PQLC2Q6ZP29 291 aa9.49□□□□□ -0.89
PDE6C-201ENST00000371447 OSR1Q8TAX0 266 aaPredicted RBP9.49□□□□□ -0.89
PDE6C-201ENST00000371447 A0A1W2PPI3 338 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 XKRY2A2RUG3 117 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 MT-CO2P00403 227 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 RANP62826 216 aaKnown RBP9.48□□□□□ -0.89
PDE6C-201ENST00000371447 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 VMA21Q3ZAQ7 101 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 TMEM155Q4W5P6 130 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
PDE6C-201ENST00000371447 OR5AU1Q8NGC0 362 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 OR5AN1Q8NGI8 311 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 SLC25A33Q9BSK2 321 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 GGACTQ9BVM4 153 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
PDE6C-201ENST00000371447 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 GRIFINA4D1Z8 144 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 PDE6DO43924 150 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 PFN1P07737 140 aaKnown RBP9.48□□□□□ -0.89
PDE6C-201ENST00000371447 TMEM144Q7Z5S9 345 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 FAM90A9PA6NNJ1 464 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 HOXA5P20719 270 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 CA7P43166 264 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 CD69Q07108 199 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 PYY3Q5JQD4 70 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 TMEM186Q96B77 213 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 FKBP11Q9NYL4 201 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 SLC45A2Q9UMX9 530 aa9.48□□□□□ -0.89
PDE6C-201ENST00000371447 ADORA2A-AS1P86434 159 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 ASCL2Q99929 193 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 NDUFA4L2Q9NRX3 87 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 BET1LQ9NYM9 111 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 CFAP46Q8IYW2 2715 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 CBY3A6NI87 242 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 ZNF705GA8MUZ8 300 aaPredicted RBP9.47□□□□□ -0.89
PDE6C-201ENST00000371447 USF1P22415 310 aaPredicted RBP9.47□□□□□ -0.89
PDE6C-201ENST00000371447 CDX1P47902 265 aaPredicted RBP9.47□□□□□ -0.89
PDE6C-201ENST00000371447 RPL29P47914 159 aaKnown RBP9.47□□□□□ -0.89
PDE6C-201ENST00000371447 MMDQ15546 238 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 SSBP3Q9BWW4 388 aaPredicted RBP9.47□□□□□ -0.89
PDE6C-201ENST00000371447 ZNF355PQ9NSJ1 428 aa9.47□□□□□ -0.89
PDE6C-201ENST00000371447 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 IGHV3-35A0A0C4DH35 117 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 CGB1A6NKQ9 187 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 C22orf46C9J442 243 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 CD33P20138 364 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 CBLN1P23435 193 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 IL3RAP26951 378 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 GNG5P63218 68 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 KLRB1Q12918 225 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 C11orf42Q8N5U0 333 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 NEU1Q99519 415 aa9.46□□□□□ -0.89
PDE6C-201ENST00000371447 CTDSP1Q9GZU7 261 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms