RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PEX7O00628 323 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 SRD5A1P18405 259 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 TCF15Q12870 199 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 RNF151Q2KHN1 245 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 NMUP48645 174 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 PAX8Q06710 450 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 GGCTO75223 188 aaKnown RBP12.17□□□□□ -0.46
NDC1-201ENST00000371429 TCTAP57738 103 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
NDC1-201ENST00000371429 PLXNA3P51805 1871 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 HGFACQ04756 655 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
NDC1-201ENST00000371429 SLC50A1Q9BRV3 221 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 NDUFS8O00217 210 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 SFRP2Q96HF1 295 aa12.17□□□□□ -0.46
NDC1-201ENST00000371429 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
NDC1-201ENST00000371429 C18orf12Q96KH6 178 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 Q9H3A6 140 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 A6NNC1 897 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 PRSS8Q16651 343 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 ZNF585BQ52M93 769 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 PAPPA-AS1Q5QFB9 102 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 GLMPQ8WWB7 406 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 GFI1Q99684 422 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 TRGC2P03986 189 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 KIAA1644Q3SXP7 199 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 Q5PR19 223 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 GTSCR1Q86UQ5 136 aa12.16□□□□□ -0.46
NDC1-201ENST00000371429 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.46
NDC1-201ENST00000371429 LEPROTL1O95214 131 aa12.15□□□□□ -0.46
NDC1-201ENST00000371429 TMEM42Q69YG0 159 aa12.15□□□□□ -0.46
NDC1-201ENST00000371429 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
NDC1-201ENST00000371429 KIAA2026Q5HYC2 2103 aa12.15□□□□□ -0.46
NDC1-201ENST00000371429 OR10W1Q8NGF6 305 aa12.15□□□□□ -0.46
NDC1-201ENST00000371429 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
NDC1-201ENST00000371429 DUSP14O95147 198 aaKnown RBP12.15□□□□□ -0.46
NDC1-201ENST00000371429 NAT1P18440 290 aa12.15□□□□□ -0.46
NDC1-201ENST00000371429 OTX1P32242 354 aaPredicted RBP12.15□□□□□ -0.46
NDC1-201ENST00000371429 SRIP30626 198 aa12.15□□□□□ -0.47
NDC1-201ENST00000371429 C15orf32Q32M92 178 aa12.15□□□□□ -0.47
NDC1-201ENST00000371429 LEMD1Q68G75 181 aa12.15□□□□□ -0.47
NDC1-201ENST00000371429 LYPD2Q6UXB3 125 aa12.15□□□□□ -0.47
NDC1-201ENST00000371429 SAP30O75446 220 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 PAX1P15863 534 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 SRSF7Q16629 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
NDC1-201ENST00000371429 ZNF506Q5JVG8 444 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 RNF5Q99942 180 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 FAM90A9PA6NNJ1 464 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 CEACAM8P31997 349 aaPredicted RBP12.14□□□□□ -0.47
NDC1-201ENST00000371429 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 CD55P08174 381 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 GCSHP23434 173 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 HBBP68871 147 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 CIARTQ8N365 385 aaPredicted RBP12.14□□□□□ -0.47
NDC1-201ENST00000371429 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 SLC25A48Q6ZT89 311 aaKnown RBP12.14□□□□□ -0.47
NDC1-201ENST00000371429 FOXL2NBQ6ZUU3 175 aa12.14□□□□□ -0.47
NDC1-201ENST00000371429 DOCK9Q9BZ29 2069 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 GRIFINA4D1Z8 144 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 VENTXO95231 258 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 MUC21A0A0G2JKD1 596 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 MUC21A0A140T8X8 626 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 ID3Q02535 119 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 MUC21Q5SSG8 566 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 NAPSAO96009 420 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 VPS25Q9BRG1 176 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 MSMBP08118 114 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 OTORQ9NRC9 128 aa12.13□□□□□ -0.47
NDC1-201ENST00000371429 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 BUB1B-PAK6H3BSN5 160 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 MAPK1IP1LQ8NDC0 245 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 TBL2Q9Y4P3 447 aaKnown RBP12.12□□□□□ -0.47
NDC1-201ENST00000371429 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 FBLL1A6NHQ2 334 aaKnown RBP12.12□□□□□ -0.47
NDC1-201ENST00000371429 PRSS2P07478 247 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 ATP5G3P48201 142 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 REC114Q7Z4M0 266 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 OR10AG1Q8NH19 301 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 DOCK10Q96BY6 2186 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 CXorf65A6NEN9 183 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 TNFSF13O75888 250 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms