RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MPV17L2Q567V2 206 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 OR4C11Q6IEV9 310 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 PPP1R27Q86WC6 154 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TEX29Q8N6K0 151 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM99Q8N816 258 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 OR51A4Q8NGJ6 313 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM54Q969K7 222 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 ULBP3Q9BZM4 244 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 EDA2RQ9HAV5 297 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 NRN1Q9NPD7 142 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
UBE3D-202ENST00000369746 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 INSIG2Q9Y5U4 225 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 LINC00312Q9Y6C7 94 aa4.15□□□□□ -1.75
UBE3D-202ENST00000369746 HEATR5AQ86XA9 2040 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 CCDC179H3BU77 68 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 K7EMT4 169 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 SLC17A2O00624 439 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 HCRTO43612 131 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 SERF1AO75920 110 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 CPSF4O95639 269 aaKnown RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 IL3RAP26951 378 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 LOXL3P58215 753 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 PSMG4Q5JS54 123 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 LCN15Q6UWW0 184 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 FDCSPQ8NFU4 85 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 OR10AG1Q8NH19 301 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 OR1L3Q8NH93 324 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 ZNRF2Q8NHG8 242 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 COX14Q96I36 57 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 PLA2G12AQ9BZM1 189 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 BCL2L10Q9HD36 194 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 PNRC2Q9NPJ4 139 aaKnown RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 OCIAD1Q9NX40 245 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 USP9XQ93008 2570 aaPredicted RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 DNAH14Q0VDD8 3507 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 HECTD1Q9ULT8 2610 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 SDK1Q7Z5N4 2213 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 A0A1W2PPM0 123 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 K7EM74 188 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 NUPR1O60356 82 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 MOSP00540 346 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 BLVRBP30043 206 aaPredicted RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 HOXD3P31249 432 aaPredicted RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 RPL23P62829 140 aaKnown RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 CR1LQ2VPA4 569 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 FBXL22Q6P050 247 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 SSX8Q7RTT4 187 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 OR4A5Q8NH83 315 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 OR1L1Q8NH94 360 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 Q8TCH9 128 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 OR5P3Q8WZ94 311 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 MAL2Q969L2 176 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 CARD19Q96LW7 228 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 HSD17B10Q99714 261 aaKnown RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 VSIRQ9H7M9 311 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF257Q9Y2Q1 563 aa4.14□□□□□ -1.75
UBE3D-202ENST00000369746 USP9YO00507 2555 aaPredicted RBP4.14□□□□□ -1.75
UBE3D-202ENST00000369746 CPAMD8Q8IZJ3 1885 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 TRAV24A0A0B4J272 114 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 MUC21A0A0G2JKD1 596 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 MUC21A0A140T8X8 626 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 VWC2LB2RUY7 222 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 J3QLW9 94 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF324O75467 553 aaPredicted RBP4.13□□□□□ -1.75
UBE3D-202ENST00000369746 SPINK8P0C7L1 97 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 FABP2P12104 132 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 GATA1P15976 413 aaPredicted RBP4.13□□□□□ -1.75
UBE3D-202ENST00000369746 AQP1P29972 269 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 MUC21Q5SSG8 566 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 HLA-DQA1Q5Y7H0 255 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 KRTAP1-3Q8IUG1 177 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 OR10D3Q8NH80 312 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 MRPL32Q9BYC8 188 aaKnown RBP4.13□□□□□ -1.75
UBE3D-202ENST00000369746 GLIPR2Q9H4G4 154 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 MYOFQ9NZM1 2061 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 CCDC88CQ9P219 2028 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 WDFY4Q6ZS81 3184 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 A0A1W2PP11 408 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM202A6NGA9 273 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 CCL21O00585 134 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 C3orf79P0CE67 100 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 IGFBP3P17936 291 aaPredicted RBP4.13□□□□□ -1.75
UBE3D-202ENST00000369746 SFTPDP35247 375 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 KRTDAPP60985 99 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 CCL20P78556 96 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 FAM219BQ5XKK7 198 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 PRSS41Q7RTY9 318 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 SYT8Q8NBV8 401 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 OR8B3Q8NGG8 313 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 OR52E2Q8NGJ4 325 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 WFDC5Q8TCV5 224 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 NEURL3Q96EH8 262 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 OR8B2Q96RD0 313 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 GNB1LQ9BYB4 327 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 OR2H1Q9GZK4 316 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 ANXA10Q9UJ72 324 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms