RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CRYBB3P26998 211 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 RIGQ13278 110 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 IBA57Q5T440 356 aaKnown RBP4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 MINOS1Q5TGZ0 78 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 LINC00305Q7Z4B0 112 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 C11orf42Q8N5U0 333 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 ARPC1AQ92747 370 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 MINOS1-NBL1R4GNA1 71 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 K7EM74 188 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 SIAH2O43255 324 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 ZNF253O75346 499 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 PSG9Q00887 426 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 GUSBP1Q15486 140 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 METTL26Q96S19 204 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 RABAC1Q9UI14 185 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 DOCK11Q5JSL3 2073 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 A0A1W2PS18 150 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 TCRBV4S1A1TA0A5B7 111 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 SNURFLB1AK76 121 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 PLAUP00749 431 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 IER3P46695 156 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 RELQ04864 619 aaPredicted RBP4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 PRSS8Q16651 343 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 GBGT1Q8N5D6 347 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 LINC00311Q8N616 119 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 EEF1AKMT3Q96AZ1 226 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 GGTLC1Q9BX51 225 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 KAAG1Q9UBP8 84 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 ARL2-SNX15V9GYD0 113 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 BDP1A6H8Y1 2624 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 IGHV1-3A0A0C4DH29 117 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 C15orf62A8K5M9 175 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TIMM23O14925 209 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 AMBPP02760 352 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 NBEAP1P0C6P0 100 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 FCGR2BP31994 310 aaPredicted RBP4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 CAMPP49913 170 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TCL1AP56279 114 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 DSCR9P59020 149 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 C17orf58Q2M2W7 97 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 SEM1Q6ZVN7 128 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 C5orf17Q8NAS9 161 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 SFRP2Q96HF1 295 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 C21orf62Q9NYP8 219 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 CACNA1BQ00975 2339 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 A0A1W2PRE2 83 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 DIRC3C9JPN6 131 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 IGKV1-39P01597 117 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 IGKV1D-39P04432 117 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 IL4P05112 153 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 PAFAH1B2P68402 229 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 SLC35B1P78383 322 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 ATP5G2Q06055 141 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 AARDQ4LEZ3 155 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TPTE2P1Q5T6R2 138 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 LYPD2Q6UXB3 125 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 RPP25LQ8N5L8 163 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 BEND2Q8NDZ0 799 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 NEUROG1Q92886 237 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 WNT10AQ9GZT5 417 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 PLCE1Q9P212 2302 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TRBV9A0A0B4J1U6 114 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 BUB1B-PAK6H3BSN5 160 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 LHBP01229 141 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 IGHV3-48P01763 117 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 HLA-DQA1P01909 254 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 STAG3L2P0CL84 134 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 STAG3L3P0CL85 134 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 CD99P14209 185 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 GNLYP22749 145 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 COL8A2P25067 703 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 PAX9P55771 341 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 MIR17HGQ75NE6 70 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 FA2HQ7L5A8 372 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 DPF1Q92782 380 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 SRSF8Q9BRL6 282 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 CEP350Q5VT06 3117 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TRBV24-1A0A075B6N3 115 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TRAV3A0A0B4J244 114 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM50AO95807 157 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 DLX6P56179 175 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 LOXL3P58215 753 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 CENPWQ5EE01 88 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 MRPL54Q6P161 138 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 PRNTQ86SH4 94 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM14BQ9NUH8 114 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM242Q9NWH2 141 aa4.35□□□□□ -1.71
SMNDC1-202ENST00000369603 USF3Q68DE3 2245 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 YLPM1P49750 1951 aaKnown RBP4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 PF4V1P10720 104 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 PRTN3P24158 256 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 TDGF1P3P51864 188 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 MFAP2P55001 183 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 DMRTA1Q5VZB9 504 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 RNASEKQ6P5S7 137 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms