RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 SOX15O60248 233 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 MT-CO2P00403 227 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 FSHBP01225 129 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 HBE1P02100 147 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 CRYGCP07315 174 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 EGR2P11161 476 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-202ENST00000369409 FGF8P55075 233 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-202ENST00000369409 COMMD1Q8N668 190 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 BPIFCQ8NFQ6 507 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 FOXC2Q99958 501 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
PHGDH-202ENST00000369409 A6NDX4 124 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 ATP6V0E1O15342 81 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 HMGB3O15347 200 aaKnown RBP13.26□□□□□ -0.29
PHGDH-202ENST00000369409 RPL29P47914 159 aaKnown RBP13.26□□□□□ -0.29
PHGDH-202ENST00000369409 BPIFB3P59826 476 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 DEFB112Q30KQ8 113 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 NANPQ8TBE9 248 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 MBD3L1Q8WWY6 194 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 TREM1Q9NP99 234 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 SLC39A9Q9NUM3 307 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 SLC45A2Q9UMX9 530 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 FLNAP21333 2647 aaKnown RBP13.26□□□□□ -0.29
PHGDH-202ENST00000369409 TEX15Q9BXT5 2789 aa13.26□□□□□ -0.29
PHGDH-202ENST00000369409 CTXND1A0A1B0GTU2 59 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 BTBD17A6NE02 478 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 ZP3P21754 424 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 CDC34P49427 236 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-202ENST00000369409 PRR20EP86478 221 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 PRR20CP86479 221 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 PRR20DP86480 221 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 PRR20BP86481 221 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 PRR20AP86496 221 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 ACTR3CQ9C0K3 210 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-202ENST00000369409 TRAV1-1A0A0B4J248 108 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 I3L2K1 104 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 CYB5BO43169 146 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 AMY1AP04745 511 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 GATA2P23769 480 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-202ENST00000369409 GUK1Q16774 197 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 ECSCRQ19T08 205 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 THAP8Q8NA92 274 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 SGMS2Q8NHU3 365 aa13.25□□□□□ -0.29
PHGDH-202ENST00000369409 IGKV1D-37A0A075B6S9 117 aa13.24□□□□□ -0.29
PHGDH-202ENST00000369409 ZFP92A6NM28 416 aa13.24□□□□□ -0.29
PHGDH-202ENST00000369409 LINC00869P0C866 280 aa13.24□□□□□ -0.29
PHGDH-202ENST00000369409 CYP2G1PQ6ZSU1 146 aa13.24□□□□□ -0.29
PHGDH-202ENST00000369409 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
PHGDH-202ENST00000369409 RAB24Q969Q5 203 aa13.24□□□□□ -0.29
PHGDH-202ENST00000369409 EIF5A2Q9GZV4 153 aaKnown RBP13.24□□□□□ -0.29
PHGDH-202ENST00000369409 LINC01548A6NM66 108 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 SEC14L6B5MCN3 397 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 KRBOX1C9JBD0 128 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 OR5T1Q8NG75 326 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 SCRT1Q9BWW7 348 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 PITPNC1Q9UKF7 332 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 IGLV11-55A0A075B6I3 123 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 TCRBV4S1A1TA0A5B7 111 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 K7EIM0 57 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 CD5P06127 495 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 ZNF90Q03938 601 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 C9orf152Q5JTZ5 239 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 FANCD2OSQ96PS1 177 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 PBDC1Q9BVG4 233 aa13.23□□□□□ -0.29
PHGDH-202ENST00000369409 A0A1W2PPV4 95 aa13.22□□□□□ -0.29
PHGDH-202ENST00000369409 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
PHGDH-202ENST00000369409 HAGHQ16775 308 aa13.22□□□□□ -0.29
PHGDH-202ENST00000369409 AKAP9Q99996 3911 aa13.22□□□□□ -0.29
PHGDH-202ENST00000369409 C9JQL5 133 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 DEFA5Q01523 94 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 C9orf139Q6ZV77 190 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 IQCF2Q8IXL9 164 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-202ENST00000369409 RARRES2Q99969 163 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 GSX1Q9H4S2 264 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-202ENST00000369409 TNFRSF19Q9NS68 423 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 GNG13Q9P2W3 67 aa13.21□□□□□ -0.29
PHGDH-202ENST00000369409 TMEM218A2RU14 115 aa13.21□□□□□ -0.3
PHGDH-202ENST00000369409 RBFOX3A6NFN3 312 aa13.21□□□□□ -0.3
PHGDH-202ENST00000369409 G3V318 75 aa13.21□□□□□ -0.3
PHGDH-202ENST00000369409 TSPAN9O75954 239 aa13.21□□□□□ -0.3
PHGDH-202ENST00000369409 S4R3C0 116 aa13.21□□□□□ -0.3
PHGDH-202ENST00000369409 M0QZK8 103 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 PEA15Q15121 130 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 TRGV9Q99603 122 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 TMPRSS5Q9H3S3 457 aa13.2□□□□□ -0.3
PHGDH-202ENST00000369409 SEPSECSQ9HD40 501 aaKnown RBP13.2□□□□□ -0.3
PHGDH-202ENST00000369409 TLN2Q9Y4G6 2542 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 OR2J3O76001 311 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 SFTA3P0C7M3 94 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 ADCYAP1P18509 176 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms