RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SELENOVP59797 346 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 NHLH1Q02575 133 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 SMIM21Q3B7S5 101 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 CNEP1R1Q8N9A8 125 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 NUP35Q8NFH5 326 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 OR10W1Q8NGF6 305 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 TNFRSF14Q92956 283 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 TNFRSF19Q9NS68 423 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 SPRR3Q9UBC9 169 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 GVINP1Q7Z2Y8 2422 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-201ENST00000369407 ADH4P08319 380 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 HSPE1P61604 102 aaKnown RBP10.05□□□□□ -0.8
PHGDH-201ENST00000369407 GABRA6Q16445 453 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-201ENST00000369407 OR2Z1Q8NG97 314 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 IGF2BP2-AS1Q96M15 143 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 CXXC4Q9H2H0 198 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 TMEM167BQ9NRX6 74 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 CNOT1A5YKK6 2376 aaKnown RBP10.05□□□□□ -0.8
PHGDH-201ENST00000369407 IGKV1D-17A0A075B6S4 117 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 MUC21A0A0G2JKD1 596 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 MUC21A0A140T8X8 626 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 IGLC7A0M8Q6 106 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 UBE2G1P62253 170 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 GNG5P63218 68 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 MUC21Q5SSG8 566 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 PMS2CLQ68D20 193 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 OR2T6Q8NHC8 308 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 RP1L1Q8IWN7 2480 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 C22orf46C9J442 243 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 TOX4O94842 621 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 UQCRFS1P47985 274 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 ATP1A1-AS1Q5TC04 95 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 FAM90A1Q86YD7 464 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 SNRNP40Q96DI7 357 aaKnown RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 PCNX2A6NKB5 2137 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 LOXL3P58215 753 aa10.04□□□□□ -0.8
PHGDH-201ENST00000369407 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-201ENST00000369407 ABCA1O95477 2261 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 J3QR06 171 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 CT45A1Q5HYN5 189 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 TCF24Q7RTU0 167 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 OR4S2Q8NH73 311 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 CT45A3Q8NHU0 189 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 KLF13Q9Y2Y9 288 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-201ENST00000369407 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 MMP23AO75900 390 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 TNFSF15O95150 251 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 IGKV1-16P04430 117 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 ZNF138P52744 262 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 RND1Q92730 232 aa10.03□□□□□ -0.8
PHGDH-201ENST00000369407 H3BTX0 84 aa10.02□□□□□ -0.8
PHGDH-201ENST00000369407 ZNF207O43670 478 aaKnown RBP10.02□□□□□ -0.8
PHGDH-201ENST00000369407 ZNF137PP52743 207 aa10.02□□□□□ -0.8
PHGDH-201ENST00000369407 RPL24P83731 157 aaKnown RBP10.02□□□□□ -0.8
PHGDH-201ENST00000369407 PSG9Q00887 426 aa10.02□□□□□ -0.8
PHGDH-201ENST00000369407 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.8
PHGDH-201ENST00000369407 OR8B3Q8NGG8 313 aa10.02□□□□□ -0.8
PHGDH-201ENST00000369407 TRIB1Q96RU8 372 aa10.02□□□□□ -0.8
PHGDH-201ENST00000369407 OR4C46A6NHA9 309 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 H0YJW9 148 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 DEFB108BQ8NET1 73 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 PRR7Q8TB68 274 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 URB1-AS1Q96HZ7 61 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 TMEM14BQ9NUH8 114 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 LAMA5O15230 3695 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 TRGV8A0A0C4DH27 118 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 IGHV1-69-2A0A0G2JMI3 117 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
PHGDH-201ENST00000369407 NDUFS8O00217 210 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 APOA2P02652 100 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 MUC15Q8N387 334 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 DDB2Q92466 427 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 TMEM186Q96B77 213 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 CHRDL1Q9BU40 450 aa10.02□□□□□ -0.81
PHGDH-201ENST00000369407 SLC25A10Q9UBX3 287 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-201ENST00000369407 AMMECR1Q9Y4X0 333 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-201ENST00000369407 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 CALYQ9NYX4 217 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 JPT1Q9UK76 154 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 NAV3Q8IVL0 2385 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 C8orf88P0DMB2 117 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 FOXE3Q13461 319 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 TBR1Q16650 682 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 BLNKQ8WV28 456 aa10.01□□□□□ -0.81
PHGDH-201ENST00000369407 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms