RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OR51B2Q9Y5P1 312 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 IGHV4-30-2A0A087WSY4 118 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 TRAV3A0A0B4J244 114 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 IGHV4-61A0A0C4DH41 118 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 A0A1W2PPI3 338 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 IFNA5P01569 189 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 SPP1P10451 314 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 CD1BP29016 333 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 UBE2E1P51965 193 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 RPL8P62917 257 aaKnown RBP6.97□□□□□ -1.29
TPM3-213ENST00000368545 PRCDQ00LT1 54 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 KLRD1Q13241 179 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 ATP6V1FQ16864 119 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 TEX45Q8NA69 505 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 GNPNAT1Q96EK6 184 aaPredicted RBP6.97□□□□□ -1.29
TPM3-213ENST00000368545 LPAR2Q9HBW0 351 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 WFDC1Q9HC57 220 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 MMP26Q9NRE1 261 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 MED9Q9NWA0 146 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 AUP1Q9Y679 476 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 IGLV2-23P01705 113 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 NHLRC4P0CG21 123 aaPredicted RBP6.96□□□□□ -1.3
TPM3-213ENST00000368545 VDAC2P45880 294 aaPredicted RBP6.96□□□□□ -1.3
TPM3-213ENST00000368545 SLC38A11Q08AI6 406 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 UBE2V1Q13404 147 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 FAM74A1Q5RGS3 127 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 ZNF600Q6ZNG1 722 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 OR10P1Q8NGE3 313 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 COMMD5Q9GZQ3 224 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 SRD5A3Q9H8P0 318 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 PLEKHA3Q9HB20 300 aa6.96□□□□□ -1.3
TPM3-213ENST00000368545 LOC105371267A0A1B0GV96 52 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 RNASEK-C17orf49H0YIS7 233 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 FGF16O43320 207 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 NDUFB4O95168 129 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 IFNA10P01566 189 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 OR8U8P0C7N1 319 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 S100A1P23297 94 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 SULT1A2P50226 295 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 RAB5CP51148 216 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 ATP5IP56385 69 aaPredicted RBP6.95□□□□□ -1.3
TPM3-213ENST00000368545 RAB11AP62491 216 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 PRB3Q04118 309 aaPredicted RBP6.95□□□□□ -1.3
TPM3-213ENST00000368545 FOXI1Q12951 378 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 SLC25A24Q6NUK1 477 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 OR4C12Q96R67 309 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 IGHV3-72A0A0B4J1Y9 119 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 A0A1W2PN81 502 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 C15orf62A8K5M9 175 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 INS-IGF2F8WCM5 200 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 TIMM23O14925 209 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 VENTXO95231 258 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 MAS1LP35410 378 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 CHRNA7P36544 502 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 PAX8Q06710 450 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 SPINK9Q5DT21 86 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 OR8G2PQ6IF36 304 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 MMD2Q8IY49 270 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 HSD17B11Q8NBQ5 300 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 OR1L8Q8NGR8 309 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 SCGB1C1Q8TD33 95 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 TMEM147Q9BVK8 224 aa6.95□□□□□ -1.3
TPM3-213ENST00000368545 TEX50A0A1B0GTY4 177 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 A0A1W2PPQ1 181 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 UMAD1C9J7I0 102 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 MSMBP08118 114 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 NPY1RP25929 384 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 SNRPEP62304 92 aaKnown RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 COMMD7Q86VX2 200 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 SLC24A4Q8NFF2 622 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 PCNPQ8WW12 178 aaKnown RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 MALSU1Q96EH3 234 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 GGACTQ9BVM4 153 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 ZNF430Q9H8G1 570 aaPredicted RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 NDUFA4L2Q9NRX3 87 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 HILPDAQ9Y5L2 63 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 WNK2Q9Y3S1 2297 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 ZNF705EA8MWA4 302 aaPredicted RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 B4DSR2 109 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 MOSP00540 346 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 ATP6V0CP27449 155 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 ARL16Q0P5N6 197 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 LDLRAD2Q5SZI1 272 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 ZNF418Q8TF45 676 aaPredicted RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 CXorf58Q96LI9 332 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 PSMG3Q9BT73 122 aaPredicted RBP6.94□□□□□ -1.3
TPM3-213ENST00000368545 HINT2Q9BX68 163 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 UQCC1Q9NVA1 299 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 SIGLEC9Q9Y336 463 aa6.94□□□□□ -1.3
TPM3-213ENST00000368545 TNCP24821 2201 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 CRYGBP07316 175 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 ERHP84090 104 aaKnown RBP6.93□□□□□ -1.3
TPM3-213ENST00000368545 PSG5Q15238 335 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms