RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 VSIRQ9H7M9 311 aa7.86□□□□□ -1.15
TPM3-210ENST00000368530 NDUFA4L2Q9NRX3 87 aa7.86□□□□□ -1.15
TPM3-210ENST00000368530 SERTAD4Q9NUC0 356 aa7.86□□□□□ -1.15
TPM3-210ENST00000368530 A0A1B0GW64 132 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 CGB1A6NKQ9 187 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 ACTL6BO94805 426 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 REG1AP05451 166 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 CRYGBP07316 175 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 SNRNP70P08621 437 aaKnown RBP7.85□□□□□ -1.15
TPM3-210ENST00000368530 APELAP0DMC3 54 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
TPM3-210ENST00000368530 Q8N2B8 174 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 BPIFCQ8NFQ6 507 aa7.85□□□□□ -1.15
TPM3-210ENST00000368530 PARD6GQ9BYG4 376 aaPredicted RBP7.85□□□□□ -1.15
TPM3-210ENST00000368530 PRSS46E5RG02 174 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.15
TPM3-210ENST00000368530 SCAF4O95104 1147 aaKnown RBP7.84□□□□□ -1.15
TPM3-210ENST00000368530 CD1BP29016 333 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 SNCAP37840 140 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 ERHP84090 104 aaKnown RBP7.84□□□□□ -1.15
TPM3-210ENST00000368530 TNP2Q05952 138 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 MMDQ15546 238 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 VWC2Q2TAL6 325 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 IL34Q6ZMJ4 242 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 MMD2Q8IY49 270 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 EIF4E3Q8N5X7 224 aaKnown RBP7.84□□□□□ -1.15
TPM3-210ENST00000368530 OR2T6Q8NHC8 308 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 PSMG3Q9BT73 122 aaPredicted RBP7.84□□□□□ -1.15
TPM3-210ENST00000368530 NPCDR1Q9BY65 106 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 ZNF702PQ9H963 129 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 TREM1Q9NP99 234 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 AURKAIP1Q9NWT8 199 aaPredicted RBP7.84□□□□□ -1.15
TPM3-210ENST00000368530 COL7A1Q02388 2944 aa7.84□□□□□ -1.15
TPM3-210ENST00000368530 A0A1W2PN81 502 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 RAB19A4D1S5 217 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 FCN1O00602 326 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 MOSP00540 346 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 OR13C7P0DN81 318 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 RNASE2P10153 161 aaKnown RBP7.83□□□□□ -1.16
TPM3-210ENST00000368530 CD28P10747 220 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 CHRNA7P36544 502 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 RPL27AP46776 148 aaKnown RBP7.83□□□□□ -1.16
TPM3-210ENST00000368530 RAB2AP61019 212 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 CCL20P78556 96 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 DLK1P80370 383 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 WT1-ASQ06250 92 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 HABP2Q14520 560 aaPredicted RBP7.83□□□□□ -1.16
TPM3-210ENST00000368530 FFAR4Q5NUL3 377 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
TPM3-210ENST00000368530 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 CCDC144NLQ6NUI1 221 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 ACSM6Q6P461 480 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 ZNF709Q8N972 641 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 MRAPQ8TCY5 172 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 EAF1Q96JC9 268 aaPredicted RBP7.83□□□□□ -1.16
TPM3-210ENST00000368530 WNT10AQ9GZT5 417 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 RPRMQ9NS64 109 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 WDR83OSQ9Y284 106 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 TBL2Q9Y4P3 447 aaKnown RBP7.83□□□□□ -1.16
TPM3-210ENST00000368530 MINOS1-NBL1R4GNA1 71 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 RYR3Q15413 4870 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 NUDT19A8MXV4 375 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 NBR2O15453 112 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 CD33P20138 364 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 ZP3P21754 424 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 MLANAQ16655 118 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 C2orf83Q53S99 150 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 TMEM41BQ5BJD5 291 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 Q6ZS46 218 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 C19orf35Q6ZS72 473 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 PPP1R27Q86WC6 154 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 WFDC9Q8NEX5 89 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 OR2T10Q8NGZ9 312 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 RNF5Q99942 180 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 GGACTQ9BVM4 153 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 KIAA1456Q9P272 454 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 TIMM9Q9Y5J7 89 aa7.83□□□□□ -1.16
TPM3-210ENST00000368530 IGLC7A0M8Q6 106 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 NCBP2LA6PVI3 153 aaKnown RBP7.82□□□□□ -1.16
TPM3-210ENST00000368530 OOSP1A8MZH6 123 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 C17orf112F2Z3M2 114 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 CNIH1O95406 144 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 AREGP15514 252 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 TMEM11P17152 192 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 SERF2P84101 59 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 BSXQ3C1V8 233 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 NSUN5P1Q3KNT7 163 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 SPSB3Q6PJ21 355 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 UQCC3Q6UW78 93 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 LCN15Q6UWW0 184 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 DPPA3Q6W0C5 159 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 SSX7Q7RTT5 188 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 ABHD5Q8WTS1 349 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 RCC1LQ96I51 464 aaKnown RBP7.82□□□□□ -1.16
TPM3-210ENST00000368530 P2RX4Q99571 388 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 MGST2Q99735 147 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms