RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 SLC25A4P12235 298 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 SYNJ2BPP57105 145 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 KRTAP10-11P60412 298 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 KLF5Q13887 457 aaPredicted RBP11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 RPEL1Q2QD12 228 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 TMUB2Q71RG4 321 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR4D5Q8NGN0 318 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 MISP3Q96FF7 219 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 CXorf58Q96LI9 332 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 ZC4H2Q9NQZ6 224 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 THYN1Q9P016 225 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 TNFSF18Q9UNG2 199 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 DNAH3Q8TD57 4116 aa11.54□□□□□ -0.56
SMPDL3A-201ENST00000368440 K7EPK0 472 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 CYB5BO43169 146 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 PET100P0DJ07 73 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 RNASE2P10153 161 aaKnown RBP11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 C9orf66Q5T8R8 295 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 INO80EQ8NBZ0 244 aaPredicted RBP11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 SCARB1Q8WTV0 552 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 RLN2P04090 185 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 GPR183P32249 361 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 ARL3P36405 182 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 NKX2-1P43699 371 aaPredicted RBP11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 OPCMLQ14982 345 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 ACSM6Q6P461 480 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR1L6Q8NGR2 347 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 ENY2Q9NPA8 101 aa11.53□□□□□ -0.56
SMPDL3A-201ENST00000368440 A0A1B0GU03 582 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 I3L2K1 104 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 WIPF1O43516 503 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 SSSCA1O60232 199 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 PITX3O75364 302 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 DEDDO75618 318 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 OR2C1O95371 312 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 CLEC3BP05452 202 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 SNCAP37840 140 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 BSXQ3C1V8 233 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 HSPB7Q9UBY9 170 aa11.52□□□□□ -0.57
SMPDL3A-201ENST00000368440 RNF222A6NCQ9 220 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 GGCTO75223 188 aaKnown RBP11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 SAP30O75446 220 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 S100A11P31949 105 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 NUP62P37198 522 aaPredicted RBP11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 EGFEM1PQ0D2K5 195 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 RBKSQ9H477 322 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 HEYLQ9NQ87 328 aaPredicted RBP11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 C21orf62Q9NYP8 219 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 WRBO00258 174 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 MT-CO2P00403 227 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 ACOT7LQ6ZUV0 252 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 HAPLN4Q86UW8 402 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
SMPDL3A-201ENST00000368440 PIGBOS1A0A0B4J2F0 54 aa11.5□□□□□ -0.57
SMPDL3A-201ENST00000368440 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
SMPDL3A-201ENST00000368440 EDN2P20800 178 aa11.5□□□□□ -0.57
SMPDL3A-201ENST00000368440 IL34Q6ZMJ4 242 aa11.5□□□□□ -0.57
SMPDL3A-201ENST00000368440 TMEM170AQ8WVE7 144 aa11.5□□□□□ -0.57
SMPDL3A-201ENST00000368440 TGOLN2O43493 480 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 SLC25A6P12236 298 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 DTD1Q8TEA8 209 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 KANTRA0A1W2PQU2 76 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 E5RGE8 158 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 IAPPP10997 89 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 LYL1P12980 280 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 C4BPBP20851 252 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 SUB1P53999 127 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 VAMP2P63027 116 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 OR2F1Q13607 317 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 Q56UQ5 140 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 KCNRGQ8N5I3 272 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 SLC24A4Q8NFF2 622 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
SMPDL3A-201ENST00000368440 A0A0D9SG52 128 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 H3BP45 60 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 CSN3P07498 182 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 RPL12P30050 165 aaKnown RBP11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 ADMP35318 185 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 HTR2BP41595 481 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 CAV2P51636 162 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms