RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 DLX6P56179 175 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 USF2Q15853 346 aaPredicted RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 TGIF2LXQ8IUE1 241 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 STXBP6Q8NFX7 210 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 TBX15Q96SF7 602 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 CHRDL1Q9BU40 450 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 FNDC4Q9H6D8 234 aaPredicted RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 ZNF355PQ9NSJ1 428 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 NAT8BQ9UHF3 227 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 DYSFO75923 2080 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 KLK10O43240 276 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 ZNF329Q86UD4 541 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 WIPF2Q8TF74 440 aaPredicted RBP11.54□□□□□ -0.56
CD48-201ENST00000368045 HSPB9Q9BQS6 159 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 GNB4Q9HAV0 340 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 NGBQ9NPG2 151 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 IGKV1D-37A0A075B6S9 117 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 TRAV5A0A0B4J249 113 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 E7EUB6 86 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 PEX7O00628 323 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 FXYD3Q14802 87 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 TPTE2P1Q5T6R2 138 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 ZCCHC24Q8N2G6 241 aaKnown RBP11.53□□□□□ -0.56
CD48-201ENST00000368045 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 TEX45Q8NA69 505 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 CCL17Q92583 94 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 TNFRSF14Q92956 283 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 ZNF586Q9NXT0 402 aa11.53□□□□□ -0.56
CD48-201ENST00000368045 M0R143 59 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 FSTL3O95633 263 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 CRYGCP07315 174 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 LYPD2Q6UXB3 125 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 TOMM20LQ6UXN7 152 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 PATE2Q6UY27 113 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 RNASE6Q93091 150 aaKnown RBP11.52□□□□□ -0.57
CD48-201ENST00000368045 MBD6Q96DN6 1003 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 PERPQ96FX8 193 aa11.52□□□□□ -0.57
CD48-201ENST00000368045 REG1AP05451 166 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 GPX1P07203 203 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 FRMD6-AS1P0C7T7 363 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 SSBP2P81877 361 aaPredicted RBP11.51□□□□□ -0.57
CD48-201ENST00000368045 PAX2Q02962 417 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 C10orf55Q5SWW7 151 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 C22orf15Q8WYQ4 148 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 GRAMD2BQ96HH9 432 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 TRGV9Q99603 122 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 ZNF331Q9NQX6 463 aaPredicted RBP11.51□□□□□ -0.57
CD48-201ENST00000368045 SERTAD4Q9NUC0 356 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 ZNF835Q9Y2P0 537 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 M0QZK8 103 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 SLC25A17O43808 307 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 IGHV1-8P0DP01 117 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 MYCNOSP40205 109 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 KCNS1Q96KK3 526 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 DYNLRB1Q9NP97 96 aa11.51□□□□□ -0.57
CD48-201ENST00000368045 CORTO00230 105 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 BMPR1BO00238 502 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 APCSP02743 223 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 RNF224P0DH78 156 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 PYYP10082 97 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 TCL1AP56279 114 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
CD48-201ENST00000368045 DIAPH2-AS1Q14236 149 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 PRRC2CQ9Y520 2896 aaKnown RBP11.5□□□□□ -0.57
CD48-201ENST00000368045 SVILO95425 2214 aa11.5□□□□□ -0.57
CD48-201ENST00000368045 IGLC7A0M8Q6 106 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 EREGO14944 169 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 RAB4AP20338 218 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 MRGPRG-AS1Q2M3A8 158 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
CD48-201ENST00000368045 GFRALQ6UXV0 394 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 MIEN1Q9BRT3 115 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 SNHG12Q9BXW3 62 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 CBLN4Q9NTU7 201 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 MRPL27Q9P0M9 148 aaKnown RBP11.49□□□□□ -0.57
CD48-201ENST00000368045 KLF12Q9Y4X4 402 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 F2Z2F3 143 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 ZNF253O75346 499 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 HIST1H1EP10412 219 aaKnown RBP11.49□□□□□ -0.57
CD48-201ENST00000368045 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms