RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC24A4Q8NFF2 622 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 WIPF2Q8TF74 440 aaPredicted RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 PLPPR2Q96GM1 343 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 RBM14Q96PK6 669 aaKnown RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 S1PR3Q99500 378 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 TMEM208Q9BTX3 173 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 PATZ1Q9HBE1 687 aaKnown RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 IL19Q9UHD0 177 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 ZNF257Q9Y2Q1 563 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 SNURFLB1AK76 121 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 K7EN84 100 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 OVOL3O00110 214 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 FCN1O00602 326 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 RRHO14718 337 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 FCGR3BO75015 233 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 ZNF253O75346 499 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 PROP1O75360 226 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 CRLF1O75462 422 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 IGHV1-2P23083 117 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 CBLN1P23435 193 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 CTRLP40313 264 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 CEBPDP49716 269 aaPredicted RBP9.39□□□□□ -0.91
USF1-201ENST00000368019 TAS2R45P59539 299 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 COL5A1-AS1Q5SY13 56 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 CYB5R2Q6BCY4 276 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 TCF23Q7RTU1 214 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 LRP11Q86VZ4 500 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 BAGE3Q86Y29 109 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 BAGE2Q86Y30 109 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 CHRDL1Q9BU40 450 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 C12orf49Q9H741 205 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 TMEM140Q9NV12 185 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 AURKAIP1Q9NWT8 199 aaPredicted RBP9.39□□□□□ -0.91
USF1-201ENST00000368019 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
USF1-201ENST00000368019 UQCR10Q9UDW1 63 aa9.39□□□□□ -0.91
USF1-201ENST00000368019 SRRM5B3KS81 715 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 AMY1AP04745 511 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 CELA3BP08861 270 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 IRF2P14316 349 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 SSTR5P35346 364 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 MPV17P39210 176 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 GNG4P50150 75 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 ATP5J2P56134 94 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 TIGITQ495A1 244 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
USF1-201ENST00000368019 Q6ZT83 130 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 WFDC8Q8IUA0 241 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 Q8N976 141 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 Q8TCH9 128 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 C1orf159Q96HA4 380 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 IFI27L2Q9H2X8 130 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 LPAR2Q9HBW0 351 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 ENY2Q9NPA8 101 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
USF1-201ENST00000368019 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
USF1-201ENST00000368019 A0A1B0GUS0 222 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 SMIM27A0A1W2PRY6 76 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 HELTA6NFD8 242 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 PGPEP1LA6NFU8 196 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 M0R1X1 148 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 IGLV1-44P01699 117 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 CGB3P0DN86 165 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 CGB7P0DN87 165 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 DEFA4P12838 97 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 PRDX2P32119 198 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 PRRX1P54821 245 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 LOXL3P58215 753 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 FAM162BQ5T6X4 162 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 Q6ZR03 302 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 TMEM136Q6ZRR5 245 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 OR5B3Q8NH48 314 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 MSL2Q9HCI7 577 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 GNG12Q9UBI6 72 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 PRNDQ9UKY0 176 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
USF1-201ENST00000368019 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 DIRC3C9JPN6 131 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 WNT9BO14905 357 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 LINC00869P0C866 280 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 G0S2P27469 103 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms