RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 HIPK2Q9H2X6 1198 aa12.75□□□□□ -0.37
CKLF-204ENST00000362093 RBKSQ9H477 322 aa12.75□□□□□ -0.37
CKLF-204ENST00000362093 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
CKLF-204ENST00000362093 TMED3Q9Y3Q3 217 aa12.75□□□□□ -0.37
CKLF-204ENST00000362093 A8MZ25 164 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 LYRM1O43325 122 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 GNG7O60262 68 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 TMEM50AO95807 157 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 TMEM170AQ8WVE7 144 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
CKLF-204ENST00000362093 U3KQ87 197 aa12.74□□□□□ -0.37
CKLF-204ENST00000362093 C15orf62A8K5M9 175 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 OR4E1P0C645 316 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
CKLF-204ENST00000362093 ANXA7P20073 488 aaKnown RBP12.73□□□□□ -0.37
CKLF-204ENST00000362093 OPRK1P41145 380 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 TMEM61Q8N0U2 210 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 OR1S1Q8NH92 325 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 DTD1Q8TEA8 209 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 WDR89Q96FK6 387 aaPredicted RBP12.73□□□□□ -0.37
CKLF-204ENST00000362093 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 C20orf24Q9BUV8 137 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 BATF3Q9NR55 127 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 C19orf73Q9NVV2 129 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 SELENOKQ9Y6D0 94 aa12.73□□□□□ -0.37
CKLF-204ENST00000362093 IGHV3OR16-8A0A075B7F1 116 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 CLN5O75503 358 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 HOXB5P09067 269 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 IGHV4-30-4P0DP06 118 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 NPY1RP25929 384 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 DHRS2Q13268 280 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 GGNBP1Q5YKI7 109 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 BTNL8Q6UX41 500 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 LYG2Q86SG7 212 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 GTSCR1Q86UQ5 136 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 NOXA1Q86UR1 476 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
CKLF-204ENST00000362093 ASCL2Q99929 193 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 PTTG2Q9NZH5 202 aa12.72□□□□□ -0.37
CKLF-204ENST00000362093 TRAV25A0A0B4J276 109 aa12.71□□□□□ -0.37
CKLF-204ENST00000362093 RPS10-NUDT3A0A1W2PQS6 291 aa12.71□□□□□ -0.37
CKLF-204ENST00000362093 FAM90A26D6RGX4 464 aa12.71□□□□□ -0.37
CKLF-204ENST00000362093 ZNF207O43670 478 aaKnown RBP12.71□□□□□ -0.37
CKLF-204ENST00000362093 TCRBP04435 133 aa12.71□□□□□ -0.37
CKLF-204ENST00000362093 GUCA2BQ16661 112 aa12.71□□□□□ -0.37
CKLF-204ENST00000362093 YIF1AO95070 293 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 IFNA10P01566 189 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 CD7P09564 240 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 ATP5IP56385 69 aaPredicted RBP12.7□□□□□ -0.38
CKLF-204ENST00000362093 C4orf46Q504U0 113 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 PRSS54Q6PEW0 395 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 SBSPONQ8IVN8 264 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 TMEM116Q8NCL8 245 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 COQ8AQ8NI60 647 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 NEURL2Q9BR09 285 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 SMPXQ9UHP9 88 aa12.7□□□□□ -0.38
CKLF-204ENST00000362093 TRAV30A0A087WSZ9 112 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 ADAP1O75689 374 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 IGKV1-17P01599 117 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 SLC25A4P12235 298 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 CD81P60033 236 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 C20orf85Q9H1P6 137 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 TBC1D24Q9ULP9 559 aa12.69□□□□□ -0.38
CKLF-204ENST00000362093 DNAH9Q9NYC9 4486 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 NBEAL2Q6ZNJ1 2754 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 TRAV14DV4A0A0A6YYC5 116 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 MPTX1A8MV57 137 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 CHEK1O14757 476 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 MED6O75586 246 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 SCAF4O95104 1147 aaKnown RBP12.68□□□□□ -0.38
CKLF-204ENST00000362093 ID3Q02535 119 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 ZNF846Q147U1 533 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 ETFRF1Q6IPR1 90 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 RBPMS2Q6ZRY4 209 aaKnown RBP12.68□□□□□ -0.38
CKLF-204ENST00000362093 OR52B4Q8NGK2 314 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 MITD1Q8WV92 249 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 WDR12Q9GZL7 423 aaKnown RBP12.68□□□□□ -0.38
CKLF-204ENST00000362093 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
CKLF-204ENST00000362093 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
CKLF-204ENST00000362093 TSPAN4O14817 238 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 SYNGR2O43760 224 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 IGLC1P0CG04 106 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 RND2P52198 227 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 TIGITQ495A1 244 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 NPIPB3Q92617 1050 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
CKLF-204ENST00000362093 RYR3Q15413 4870 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 TRAV6A0A075B6T7 132 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 UPK1BO75841 260 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 IFNA21P01568 189 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 IAPPP10997 89 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 ASAH1Q13510 395 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 LAMTOR1Q6IAA8 161 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms