RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SCGB3A1Q96QR1 104 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 ERGIC3Q9Y282 383 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 LHFPL6Q9Y693 200 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 RTL1A6NKG5 1358 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 TRAV4A0A0B4J268 109 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 ZNF860A6NHJ4 632 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 TMEM238C9JI98 176 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 CRYGAP11844 174 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 MAGEA12P43365 314 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 HSPE1P61604 102 aaKnown RBP1.93□□□□□ -2.1
RPL39-201ENST00000361575 FAM173BQ6P4H8 233 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 GOLT1AQ6ZVE7 132 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 LCA10Q71F78 164 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 TMEM86AQ8N2M4 240 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 OR8B3Q8NGG8 313 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 WFDC5Q8TCV5 224 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 AP3S1Q92572 193 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 SLC39A9Q9NUM3 307 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 SDK1Q7Z5N4 2213 aa1.93□□□□□ -2.1
RPL39-201ENST00000361575 TRAPPC13A5PLN9 417 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 ORC5O43913 435 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 ZNF345Q14585 488 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 NNATQ16517 81 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 ARHGAP11BQ3KRB8 267 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 Q6ZQT0 140 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 C7orf65Q6ZTY9 151 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 LYG2Q86SG7 212 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 GNPDA2Q8TDQ7 276 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 ADAT3Q96EY9 351 aaPredicted RBP1.92□□□□□ -2.1
RPL39-201ENST00000361575 C2orf50Q96LR7 162 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 TVP23BQ9NYZ1 205 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 EIF3AQ14152 1382 aaKnown RBP1.92□□□□□ -2.1
RPL39-201ENST00000361575 GLI3P10071 1580 aa1.92□□□□□ -2.1
RPL39-201ENST00000361575 TONSLQ96HA7 1378 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 IGKV1-9A0A0C4DH69 117 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 CTSDP07339 412 aaPredicted RBP1.91□□□□□ -2.1
RPL39-201ENST00000361575 ERP29P30040 261 aaKnown RBP1.91□□□□□ -2.1
RPL39-201ENST00000361575 ATP5G3P48201 142 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 GNG10P50151 68 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 KRR1Q13601 381 aaKnown RBP1.91□□□□□ -2.1
RPL39-201ENST00000361575 Q1T7F1 81 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 HIST3H2BBQ8N257 126 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 SIGLECL1Q8N7X8 197 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 TMEM133Q9H2Q1 129 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 RNF122Q9H9V4 155 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 C8orf4Q9NR00 106 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 MED12LQ86YW9 2145 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 CR1P17927 2039 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 DENND4CQ5VZ89 1909 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 RGS12O14924 1447 aa1.91□□□□□ -2.1
RPL39-201ENST00000361575 HTR1AP08908 422 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 GPX2P18283 190 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 G0S2P27469 103 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 CASP1P29466 404 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 COA5Q86WW8 74 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 OR5A1Q8NGJ0 315 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 CKLFQ9UBR5 152 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 STOML2Q9UJZ1 356 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 HEATR5BQ9P2D3 2071 aa1.9□□□□□ -2.11
RPL39-201ENST00000361575 MYH3P11055 1940 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 MYH2Q9UKX2 1941 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 IGKV1D-42A0A075B6H8 117 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 HMGB3O15347 200 aaKnown RBP1.89□□□□□ -2.11
RPL39-201ENST00000361575 PMP2P02689 132 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 GPR146Q96CH1 333 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 PRRT1Q99946 306 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 HOPXQ9BPY8 73 aaPredicted RBP1.89□□□□□ -2.11
RPL39-201ENST00000361575 OSTCQ9NRP0 149 aa1.89□□□□□ -2.11
RPL39-201ENST00000361575 TRBV19A0A075B6N1 114 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 C1orf196B1AJZ1 125 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 C19orf84I3L1E1 186 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 METTL15P1P0C7V9 234 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 ZNF705BP0CI00 300 aaPredicted RBP1.88□□□□□ -2.11
RPL39-201ENST00000361575 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
RPL39-201ENST00000361575 PIGPP57054 158 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 RPL19P84098 196 aaKnown RBP1.88□□□□□ -2.11
RPL39-201ENST00000361575 ZNF846Q147U1 533 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 NDUFA5Q16718 116 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 STAG3L4Q8TBR4 150 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 Q96M85 177 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 GINS4Q9BRT9 223 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 UTP11Q9Y3A2 253 aaKnown RBP1.88□□□□□ -2.11
RPL39-201ENST00000361575 OBSL1O75147 1896 aa1.88□□□□□ -2.11
RPL39-201ENST00000361575 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
RPL39-201ENST00000361575 SULT1B1O43704 296 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 OR5F1O95221 314 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 SPI1P17947 270 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 S100A4P26447 101 aaKnown RBP1.87□□□□□ -2.11
RPL39-201ENST00000361575 RNASE4P34096 147 aaKnown RBP1.87□□□□□ -2.11
RPL39-201ENST00000361575 MED1Q15648 1581 aaPredicted RBP1.87□□□□□ -2.11
RPL39-201ENST00000361575 ZNF826PQ6ZT77 177 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 WFDC11Q8NEX6 87 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 OR8D4Q8NGM9 314 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 MIA2Q96PC5 1412 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 MED29Q9NX70 200 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 PRNDQ9UKY0 176 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 DOCK4Q8N1I0 1966 aa1.87□□□□□ -2.11
RPL39-201ENST00000361575 MYOFQ9NZM1 2061 aa1.86□□□□□ -2.11
RPL39-201ENST00000361575 A0A0D9SG52 128 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms