RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 CYB5R2Q6BCY4 276 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 ERASQ7Z444 233 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 IL36BQ9NZH7 164 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
LDB3-202ENST00000361373 IGKV1D-8A0A087WSZ0 117 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
LDB3-202ENST00000361373 RNF224P0DH78 156 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 GATA3P23771 443 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 CIRBPQ14011 172 aaKnown RBP11.14□□□□□ -0.63
LDB3-202ENST00000361373 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 ASCL4Q6XD76 172 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 NEU1Q99519 415 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 SDF2L1Q9HCN8 221 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 DMRTA2Q96SC8 542 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 IGHV1-3A0A0C4DH29 117 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 MDKP21741 143 aaPredicted RBP11.13□□□□□ -0.63
LDB3-202ENST00000361373 LEPP41159 167 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 SPSB3Q6PJ21 355 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
LDB3-202ENST00000361373 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 LY6G6FQ5SQ64 297 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 DUX3Q96PT4 197 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 MYO7BQ6PIF6 2116 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 EIF3GO75821 320 aaKnown RBP eCLIP11.13□□□□□ -0.63
LDB3-202ENST00000361373 NMUP48645 174 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 PAX8Q06710 450 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
LDB3-202ENST00000361373 TANC1Q9C0D5 1861 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 COX6CP09669 75 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
LDB3-202ENST00000361373 IGHV3-66A0A0C4DH42 116 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 CCL20P78556 96 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 Q6P435 159 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 TGIF2-C20orf24A0A0A6YYL0 155 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
LDB3-202ENST00000361373 COL4A6Q14031 1691 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
LDB3-202ENST00000361373 TFF1P04155 84 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
LDB3-202ENST00000361373 A0A087WWC5 75 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 C9JCJ5 164 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 F8VVB4 439 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 F8VWA3 439 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 SELLP14151 372 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 EGR1P18146 543 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 CBY3A6NI87 242 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 PRTN3P24158 256 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 NCOR1P1Q9H4R4 102 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 CRIM1Q9NZV1 1036 aa11.11□□□□□ -0.63
LDB3-202ENST00000361373 OVOL1O14753 267 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 MLNRO43193 412 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 GATA2P23769 480 aaPredicted RBP11.1□□□□□ -0.63
LDB3-202ENST00000361373 CD24P25063 80 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 TMEM136Q6ZRR5 245 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 FER1L6-AS1Q8NA97 138 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 LINC01587Q99440 93 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 SRSF8Q9BRL6 282 aaKnown RBP11.1□□□□□ -0.63
LDB3-202ENST00000361373 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
LDB3-202ENST00000361373 C5orf64Q2M2E5 130 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 BIVMQ86UB2 503 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 LINC01356Q8N9X3 169 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 M0R381 172 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 HGFACQ04756 655 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 STHQ8IWL8 128 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 PSMB11A5LHX3 300 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 E7EQL1 145 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
LDB3-202ENST00000361373 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 REC114Q7Z4M0 266 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 EPDR1Q9UM22 224 aa11.1□□□□□ -0.63
LDB3-202ENST00000361373 TRAV21A0A0B4J279 112 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 QRFPP83859 136 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 RAB37Q96AX2 223 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 IGKV1D-17A0A075B6S4 117 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 BUB1B-PAK6H3BSN5 160 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 ATP5LO75964 103 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 GATA4P43694 442 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 ATP5G3P48201 142 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 DOCK8Q8NF50 2099 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 CFPP27918 469 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 A0A1B0GWJ7 208 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 A0A1W2PRX2 142 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 Q8TCH9 128 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
LDB3-202ENST00000361373 H0YIZ8 118 aa11.08□□□□□ -0.63
LDB3-202ENST00000361373 FHL1Q13642 323 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms