RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 NTN5Q8WTR8 489 aaPredicted RBP4.18□□□□□ -1.74
CDC42SE2-201ENST00000360515 FRZBQ92765 325 aa4.18□□□□□ -1.74
CDC42SE2-201ENST00000360515 DERL3Q96Q80 235 aa4.18□□□□□ -1.74
CDC42SE2-201ENST00000360515 DUSP21Q9H596 190 aa4.18□□□□□ -1.74
CDC42SE2-201ENST00000360515 SSR3Q9UNL2 185 aa4.18□□□□□ -1.74
CDC42SE2-201ENST00000360515 GTF2A1LQ9UNN4 478 aa4.18□□□□□ -1.74
CDC42SE2-201ENST00000360515 A0A1W2PP11 408 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 PDCD5O14737 125 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 CA1P00915 261 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 IFNA21P01568 189 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 IFNA17P01571 189 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 MBP02144 154 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 SPART-AS1P0CW21 52 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 RD3LP0DJH9 198 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 GADD45AP24522 165 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 CEACAM6P40199 344 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 PPP3R1P63098 170 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 ZNF79Q15937 498 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 RNASE11Q8TAA1 199 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 GLYATL2Q8WU03 294 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 OTULINQ96BN8 352 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 SRRQ9GZT4 340 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR1A1Q9P1Q5 309 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 TPRKBQ9Y3C4 175 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 K7EIM0 57 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 CYB5BO43169 146 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR2J3O76001 311 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 LALBAP00709 142 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 IFNA10P01566 189 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 REG1AP05451 166 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 CTSGP08311 255 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 RPL27AP46776 148 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 TAS2R31P59538 309 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 UNC119Q13432 240 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 LGALSLQ3ZCW2 172 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 CLEC19AQ6UXS0 136 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 HS3ST5Q8IZT8 346 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 TMEM116Q8NCL8 245 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR11H4Q8NGC9 324 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 C14orf144Q96I85 54 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 Q96MT0 163 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 HSD17B10Q99714 261 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 NKX6-2Q9C056 277 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 V9GYH0 126 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 A0A075B6Q4 140 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 LOC100506127A0A0U1RQW1 187 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 LOC100130705A0A1B0GUX0 176 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 LINC00473A8K010 186 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 XRCC3O43542 346 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 EIF4E3Q8N5X7 224 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 DMBX1Q8NFW5 382 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 TCEAL7Q9BRU2 100 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 LPAR5Q9H1C0 372 aa4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 MRPS16Q9Y3D3 137 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-201ENST00000360515 C9orf170A2RU37 121 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 LYRM9A8MSI8 78 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 E7EUB6 86 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 PLA2G10O15496 165 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 RGS10O43665 173 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 CLEC3BP05452 202 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 HLA-GP17693 338 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 CRYBB3P26998 211 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 TAS2R43P59537 309 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 SNRPEP62304 92 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 DEFA5Q01523 94 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 FAM74A1Q5RGS3 127 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 TMPRSS11AQ6ZMR5 421 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 TTTY10Q9BZA0 68 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 ZNF355PQ9NSJ1 428 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 SCN3BQ9NY72 215 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 COMMD9Q9P000 198 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 F11RQ9Y624 299 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 TRAV8-7A0A075B6U6 113 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 CRTAPO75718 401 aaPredicted RBP4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 RAB4AP20338 218 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 PVALBP20472 110 aaPredicted RBP4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 DTYMKP23919 212 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 SAPCD1Q5SSQ6 148 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR52I1Q8NGK6 324 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 GPER1Q99527 375 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 PHB2Q99623 299 aa4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 CHTOPQ9Y3Y2 248 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
CDC42SE2-201ENST00000360515 MARCH11A6NNE9 402 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 I3L2K1 104 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 SERPINE2P07093 398 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 PPP1R8Q12972 351 aaKnown RBP4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 TNXAQ16473 311 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 ARRDC1Q8N5I2 433 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR10J5Q8NHC4 309 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 CLCC1Q96S66 551 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 S100A13Q99584 98 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 SELENOIQ9C0D9 397 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 TMEM231Q9H6L2 316 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 NDUFA4L2Q9NRX3 87 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 M0R1X1 148 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 WBP4O75554 376 aaKnown RBP4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 MED6O75586 246 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 NMBP08949 121 aa4.15□□□□□ -1.74
CDC42SE2-201ENST00000360515 NKX2-1P43699 371 aaPredicted RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms