RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 TMEM186Q96B77 213 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 PDZD2O15018 2839 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 C15orf61A6NNL5 157 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 H7BYZ3 331 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 J3QR06 171 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 PDLIM4P50479 330 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 OR4A47Q6IF82 309 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 CENPVQ7Z7K6 275 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 FAM168AQ92567 244 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 SRD5A3Q9H8P0 318 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 NAGKQ9UJ70 344 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 ARHGAP32A7KAX9 2087 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF705FA8MVS1 300 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 HSBP1L1C9JCN9 74 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 KBTBD11O94819 623 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF841Q6ZN19 808 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 CYP2G1PQ6ZSU1 146 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 TBX15Q96SF7 602 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 SEPSECSQ9HD40 501 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 FUT9Q9Y231 359 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 A0A1W2PN81 502 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 C15orf62A8K5M9 175 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 APOA2P02652 100 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 CHRNA7P36544 502 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF137PP52743 207 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 COA6Q5JTJ3 125 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 COL5A1-AS1Q5SY13 56 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 SLC24A4Q8NFF2 622 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 OR9G1Q8NH87 305 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 OSR1Q8TAX0 266 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 TCF19Q9Y242 345 aa11.22□□□□□ -0.61
CSNK1E-201ENST00000359867 IGHV4-30-2A0A087WSY4 118 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 TRAV3A0A0B4J244 114 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 PPP5D1E7EU14 171 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 PAGE4O60829 102 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 PSMB3P49720 205 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 OR5AN1Q8NGI8 311 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 OR10X1Q8NGY0 326 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 OR5B12Q96R08 314 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 PRNDQ9UKY0 176 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 RNF24Q9Y225 148 aa11.21□□□□□ -0.61
CSNK1E-201ENST00000359867 RBP4P02753 201 aa11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 STPG4Q8N801 248 aa11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 C10orf105Q8TEF2 133 aa11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 TNFRSF14Q92956 283 aa11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 VPS25Q9BRG1 176 aa11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.62
CSNK1E-201ENST00000359867 SVEP1Q4LDE5 3571 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 C8orf46Q8TAG6 207 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 ST6GALNAC6Q969X2 333 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 SLC35E1Q96K37 410 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 MRPL20Q9BYC9 149 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 HEYLQ9NQ87 328 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 BET1LQ9NYM9 111 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 ZNRD1Q9P1U0 126 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 NOTCH2Q04721 2471 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 FLNBO75369 2602 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 A0A1B0GUS0 222 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 UPK2O00526 184 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 IL3RAP26951 378 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 UBE2G2P60604 165 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 MMDQ15546 238 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 ABHD12Q8N2K0 398 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 OR8B3Q8NGG8 313 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 OR8B2Q96RD0 313 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
CSNK1E-201ENST00000359867 H0YJW9 148 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 PPBPP02775 128 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 NEIL1Q96FI4 390 aaPredicted RBP11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 PATZ1Q9HBE1 687 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 IGKV1-16P04430 117 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 OR10J1P30954 320 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 GCSAMLQ5JQS6 135 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 PDPNQ86YL7 162 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 NABP2Q9BQ15 211 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms