RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SMR3AQ99954 134 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 GSX1Q9H4S2 264 aaPredicted RBP10.7□□□□□ -0.7
CCDC197-201ENST00000359253 MOB4Q9Y3A3 225 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 ABCA1O95477 2261 aa10.7□□□□□ -0.7
CCDC197-201ENST00000359253 CR1P17927 2039 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 A0A0U1RQK1 487 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 A0A1W2PPV4 95 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 MT-CO2P00403 227 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 DEFA4P12838 97 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 RHOBP62745 196 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 KLK9Q2XQG4 91 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 FAM120AOSQ5T036 256 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 RUSC1-AS1Q66K80 236 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 C9orf139Q6ZV77 190 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 SGMS2Q8NHU3 365 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 NANPQ8TBE9 248 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 SLC25A33Q9BSK2 321 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 WNT10AQ9GZT5 417 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 TREM1Q9NP99 234 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 TNCP24821 2201 aa10.69□□□□□ -0.7
CCDC197-201ENST00000359253 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 MAP1LC3B2A6NCE7 125 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 RBFOX3A6NFN3 312 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 REG1AP05451 166 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 FABP1P07148 127 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 CDC34P49427 236 aaPredicted RBP10.68□□□□□ -0.7
CCDC197-201ENST00000359253 KHDC3LQ587J8 217 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 KLF17Q5JT82 389 aaPredicted RBP10.68□□□□□ -0.7
CCDC197-201ENST00000359253 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 CYP2G1PQ6ZSU1 146 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 STPG3Q8N7X2 389 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 BPIFCQ8NFQ6 507 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 OR4X1Q8NH49 305 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 MISP3Q96FF7 219 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 TRGV9Q99603 122 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 SSX3Q99909 188 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 SEC11CQ9BY50 192 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 MAP1LC3BQ9GZQ8 125 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 EIF5A2Q9GZV4 153 aaKnown RBP10.68□□□□□ -0.7
CCDC197-201ENST00000359253 FNDC4Q9H6D8 234 aaPredicted RBP10.68□□□□□ -0.7
CCDC197-201ENST00000359253 VSIRQ9H7M9 311 aa10.68□□□□□ -0.7
CCDC197-201ENST00000359253 TRAV30A0A087WSZ9 112 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 TCRBV4S1A1TA0A5B7 111 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 SCGB2A1O75556 95 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 PAX6P26367 422 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 OR10J1P30954 320 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 PSMB3P49720 205 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
CCDC197-201ENST00000359253 ZNF726P1Q15940 193 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 AKIRIN2Q53H80 203 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 C10orf91Q5T1B1 145 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 MIC13Q5XKP0 118 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 C5orf56Q8N8D9 126 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 OR5R1Q8NH85 324 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 PIFOQ8TCI5 191 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 GATAD1Q8WUU5 269 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 NPIPB3Q92617 1050 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 ACY3Q96HD9 319 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 NARS2Q96I59 477 aaKnown RBP10.67□□□□□ -0.7
CCDC197-201ENST00000359253 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
CCDC197-201ENST00000359253 PFDN5Q99471 154 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 YAE1D1Q9NRH1 226 aa10.67□□□□□ -0.7
CCDC197-201ENST00000359253 HIVEP2P31629 2446 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 A6NDX4 124 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 ZFP92A6NM28 416 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 I3L2K1 104 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 YIF1AO95070 293 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 AVPP01185 164 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 FSHBP01225 129 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 HSPB1P04792 205 aaKnown RBP10.66□□□□□ -0.7
CCDC197-201ENST00000359253 LINC00869P0C866 280 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 MFAP2P55001 183 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 ZNF506Q5JVG8 444 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 FAM122CQ6P4D5 195 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 SLC35E3Q7Z769 313 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 OR2T6Q8NHC8 308 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
CCDC197-201ENST00000359253 SUN5Q8TC36 379 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 LINC00052Q96N35 136 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 TXNDC17Q9BRA2 123 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 SCRT1Q9BWW7 348 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 MRPL32Q9BYC8 188 aaKnown RBP10.66□□□□□ -0.7
CCDC197-201ENST00000359253 SLC35B3Q9H1N7 401 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 MANBALQ9NQG1 85 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 CDC42EP3Q9UKI2 254 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 ZANQ9Y493 2812 aa10.66□□□□□ -0.7
CCDC197-201ENST00000359253 IGLV11-55A0A075B6I3 123 aa10.65□□□□□ -0.7
CCDC197-201ENST00000359253 IGKV1OR2-108A0A075B7D4 117 aa10.65□□□□□ -0.7
CCDC197-201ENST00000359253 ELOA3CA0A087WX78 387 aaPredicted RBP10.65□□□□□ -0.7
CCDC197-201ENST00000359253 CXorf1O96002 111 aa10.65□□□□□ -0.7
CCDC197-201ENST00000359253 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
CCDC197-201ENST00000359253 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
CCDC197-201ENST00000359253 NPBWR1P48145 328 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms