RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 ELOVL5Q9NYP7 299 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 LILRA1O75019 489 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 EBLN2Q6P2I7 272 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 DYNLRB2Q8TF09 96 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 IZUMO1RA6ND01 250 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 C9JQL5 133 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 ZNF324O75467 553 aaPredicted RBP11.41□□□□□ -0.58
VCP-201ENST00000358901 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
VCP-201ENST00000358901 STAG3L2P0CL84 134 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 LY6EQ16553 131 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 E9PLN8 166 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 AMBPP02760 352 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 GPX1P07203 203 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 CD69Q07108 199 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
VCP-201ENST00000358901 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 A6NJY4 79 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 IGKV1D-33P01593 117 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 IGKV1-33P01594 117 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 PRSS2P07478 247 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 PCP4P48539 62 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 Q9H3A6 140 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 IGHV3-66A0A0C4DH42 116 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 IL18BPO95998 194 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 RAB9AP51151 201 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 SRSF7Q16629 238 aaKnown RBP eCLIP11.4□□□□□ -0.58
VCP-201ENST00000358901 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 ABHD17AQ96GS6 310 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 A0A0G2JRQ6 117 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 CEACAM1P13688 526 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 ZNF524Q96C55 264 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
VCP-201ENST00000358901 IGHV1-18A0A0C4DH31 117 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 PMCHL2Q9BQD1 86 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 PLXNA3P51805 1871 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 A1L4Q6 167 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 PYY3Q5JQD4 70 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 TMEM14EPQ6UXP3 125 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 Q6ZRM9 215 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 DERL1Q9BUN8 251 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 SRRM5B3KS81 715 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 CSRP2Q16527 193 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 TSC2P49815 1807 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 TIMP3P35625 211 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 PRCDQ00LT1 54 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 FBXL7Q9UJT9 491 aa11.39□□□□□ -0.59
VCP-201ENST00000358901 LINC00205P59089 165 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 ATP5G2Q06055 141 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 Q0VFX4 171 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 MST1LQ2TV78 715 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 FAM57AQ8TBR7 257 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 A0A1B0GW64 132 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 CD24P25063 80 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 GPR183P32249 361 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 FAM53AQ6NSI3 398 aaPredicted RBP11.38□□□□□ -0.59
VCP-201ENST00000358901 ZSWIM8A7E2V4 1837 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 SLX1AQ9BQ83 275 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
VCP-201ENST00000358901 ZFHX2Q9C0A1 2572 aaPredicted RBP11.38□□□□□ -0.59
VCP-201ENST00000358901 M0R381 172 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 LYL1P12980 280 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 HIST1H1AQ02539 215 aaPredicted RBP11.37□□□□□ -0.59
VCP-201ENST00000358901 EPDR1Q9UM22 224 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 DLX6P56179 175 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 SPATA31B1PQ5VZV4 182 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 PPP1R27Q86WC6 154 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 FMC1Q96HJ9 113 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 SEPSECSQ9HD40 501 aaKnown RBP11.37□□□□□ -0.59
VCP-201ENST00000358901 ARFGEF3Q5TH69 2177 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 TRAV5A0A0B4J249 113 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 CFPP27918 469 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 TMPRSS3P57727 454 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 ERASQ7Z444 233 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 OR11H1Q8NG94 326 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 OR11H2Q8NH07 326 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 UTRNP46939 3433 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 LYNX1G3V0Z9 82 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 CRXO43186 299 aaPredicted RBP11.37□□□□□ -0.59
VCP-201ENST00000358901 LYNX1P0DP58 116 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 FAM106AQ4KMX7 169 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 CIARTQ8N365 385 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms