RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PPBPP02775 128 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 LY6EQ16553 131 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 Q9H3A6 140 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 FER1L6-AS1Q8NA97 138 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.8□□□□□ -0.84
COL9A1-202ENST00000357250 TRBV6-6A0A0A6YYG2 114 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 MYOD1P15172 320 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 DCTN5Q9BTE1 182 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 WNT10AQ9GZT5 417 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 DEPPQ9NTK1 212 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 ZNF319Q9P2F9 582 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 NPFFO15130 113 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 TIMP3P35625 211 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 LINC01559Q495D7 138 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 NABP1Q96AH0 204 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 HEATR5AQ86XA9 2040 aa9.8□□□□□ -0.84
COL9A1-202ENST00000357250 FABP5P3A8MUU1 101 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 SRRM5B3KS81 715 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 E9PLN8 166 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 APOHP02749 345 aaPredicted RBP9.79□□□□□ -0.84
COL9A1-202ENST00000357250 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 SLC17A3O00476 420 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 IGHV3-48P01763 117 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 CELA3BP08861 270 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 RNF5Q99942 180 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 ALKBH7Q9BT30 221 aaPredicted RBP9.79□□□□□ -0.84
COL9A1-202ENST00000357250 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 FOXA3P55318 350 aaPredicted RBP9.79□□□□□ -0.84
COL9A1-202ENST00000357250 CACNA1AO00555 2505 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 ABCA1O95477 2261 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 FAM168AQ92567 244 aa9.79□□□□□ -0.84
COL9A1-202ENST00000357250 CD5P06127 495 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 Q6ZS49 121 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 ATP5L2Q7Z4Y8 100 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 RPUSD1Q9UJJ7 312 aaKnown RBP9.78□□□□□ -0.84
COL9A1-202ENST00000357250 EPDR1Q9UM22 224 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 FAM208BQ5VWN6 2430 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 PLSCR4Q9NRQ2 329 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 HEATR1Q9H583 2144 aaKnown RBP9.78□□□□□ -0.84
COL9A1-202ENST00000357250 OOSP1A8MZH6 123 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 ATXN7O15265 892 aaPredicted RBP9.78□□□□□ -0.84
COL9A1-202ENST00000357250 GPR183P32249 361 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 MEIG1Q5JSS6 88 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 FAM201AQ5SY85 155 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 GGNQ86UU5 652 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 RSPO3Q9BXY4 272 aaPredicted RBP9.78□□□□□ -0.84
COL9A1-202ENST00000357250 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 TMEM42Q69YG0 159 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 RNF125Q96EQ8 232 aa9.78□□□□□ -0.84
COL9A1-202ENST00000357250 HIGD1CA8MV81 97 aa9.77□□□□□ -0.84
COL9A1-202ENST00000357250 H3BRM9 83 aa9.77□□□□□ -0.84
COL9A1-202ENST00000357250 NAPSAO96009 420 aa9.77□□□□□ -0.84
COL9A1-202ENST00000357250 SRSF4Q08170 494 aaKnown RBP9.77□□□□□ -0.84
COL9A1-202ENST00000357250 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.84
COL9A1-202ENST00000357250 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 HELZP42694 1942 aaKnown RBP9.77□□□□□ -0.85
COL9A1-202ENST00000357250 EFNA2O43921 213 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 CTAG1AP78358 180 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 OR10J3Q5JRS4 329 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 SCGB3A1Q96QR1 104 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 VCX2Q9H322 139 aa9.77□□□□□ -0.85
COL9A1-202ENST00000357250 NOTCH2Q04721 2471 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 IGKV1-12A0A0C4DH73 117 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 FAM181BA6NEQ2 426 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 IGKV1D-12P01611 117 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 CACNG7P62955 275 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 OR4X2Q8NGF9 303 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 WFIKKN1Q96NZ8 548 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 NXT2Q9NPJ8 142 aaKnown RBP9.76□□□□□ -0.85
COL9A1-202ENST00000357250 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
COL9A1-202ENST00000357250 OTX1P32242 354 aaPredicted RBP9.76□□□□□ -0.85
COL9A1-202ENST00000357250 KLK15Q9H2R5 256 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 PEMTQ9UBM1 199 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.76□□□□□ -0.85
COL9A1-202ENST00000357250 CCL3L1P16619 93 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 CFPP27918 469 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 EFNB3Q15768 340 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 HEPN1Q6WQI6 88 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 C1QL4Q86Z23 238 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 IGKV3-15P01624 115 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 STAG3L3P0CL85 134 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 TMEM160Q9NX00 188 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 DOCK10Q96BY6 2186 aa9.76□□□□□ -0.85
COL9A1-202ENST00000357250 IGHV3OR16-12A0A075B7B8 117 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 M0R381 172 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 FOXL2NBQ6ZUU3 175 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 PLXNA4Q9HCM2 1894 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 IGKV1D-8A0A087WSZ0 117 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 DNAL4O96015 105 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms