RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAM213BQ8TBF2 198 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 MISP3Q96FF7 219 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 DUX5Q96PT3 197 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 MGST2Q99735 147 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 HIVEP2P31629 2446 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 TSPAN9O75954 239 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 MBP02144 154 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 OPRK1P41145 380 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 CRIP2P52943 208 aaPredicted RBP14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 ZNF616Q08AN1 781 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 RAB31Q13636 194 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 TMEM41BQ5BJD5 291 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 ETFRF1Q6IPR1 90 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 UNQ5815/PRO19632Q6UWF5 114 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 MARC2Q969Z3 335 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 FANCD2OSQ96PS1 177 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 CITED4Q96RK1 184 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 HRH4Q9H3N8 390 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 KCNIP2Q9NS61 270 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 RPRMQ9NS64 109 aa14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 MRPL36Q9P0J6 103 aaKnown RBP14.25□□□□□ -0.13
SMARCD3-202ENST00000356800 IGHV3-48P01763 117 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 DEFA4P12838 97 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 S100A1P23297 94 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 AKIRIN2Q53H80 203 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 IL34Q6ZMJ4 242 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 Q71RC1 249 aaPredicted RBP14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 SLC35E3Q7Z769 313 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 OR2T6Q8NHC8 308 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 FAM110DQ8TAY7 271 aaPredicted RBP14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 SLC35E1Q96K37 410 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 GGTLC1Q9BX51 225 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 GSX1Q9H4S2 264 aaPredicted RBP14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 LINC00527Q9UJ94 153 aa14.24□□□□□ -0.13
SMARCD3-202ENST00000356800 IGF1P05019 195 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 ACSM6Q6P461 480 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 VSIRQ9H7M9 311 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 IGLV11-55A0A075B6I3 123 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 IGHV3-21A0A0B4J1V1 117 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 RAB19A4D1S5 217 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 TEX46H3BTG2 121 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 I3L2K1 104 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 AGPAT2O15120 278 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 ELLP55199 621 aaPredicted RBP14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 FFAR4Q5NUL3 377 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 TMEM86BQ8N661 226 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
SMARCD3-202ENST00000356800 IGKV1OR2-108A0A075B7D4 117 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 TRAV41A0A0B4J266 112 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 DNAJC9-AS1A6NH13 148 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 K7EIM0 57 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 MT-CO2P00403 227 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 H2AFB1P0C5Y9 115 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 RPL29P47914 159 aaKnown RBP14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 COMMD1Q8N668 190 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 TMEM68Q96MH6 324 aa14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 NOL4LQ96MY1 436 aaPredicted RBP14.22□□□□□ -0.13
SMARCD3-202ENST00000356800 TRAV1-1A0A0B4J248 108 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 TSPAN15O95858 294 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 SRD5A1P18405 259 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 M6PRP20645 277 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 KLK9Q2XQG4 91 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 RBMS3Q6XE24 437 aaKnown RBP14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 TMEM116Q8NCL8 245 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 CDC42EP3Q9UKI2 254 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 KLK9Q9UKQ9 250 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 SLC45A2Q9UMX9 530 aa14.21□□□□□ -0.13
SMARCD3-202ENST00000356800 CUBNO60494 3623 aa14.21□□□□□ -0.14
SMARCD3-202ENST00000356800 RAB2AP61019 212 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 PRR20EP86478 221 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 PRR20CP86479 221 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 PRR20DP86480 221 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 PRR20BP86481 221 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 PRR20AP86496 221 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 ACOT6Q3I5F7 207 aaPredicted RBP14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 TMEM95Q3KNT9 176 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 UQCC3Q6UW78 93 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 RPP25LQ8N5L8 163 aaKnown RBP14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 THAP8Q8NA92 274 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 MBD3L1Q8WWY6 194 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 ACY3Q96HD9 319 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 RCC1LQ96I51 464 aaKnown RBP14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 PXMP4Q9Y6I8 212 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 CYB5BO43169 146 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 B2MP61769 119 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 DEFA5Q01523 94 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 ZNF726P1Q15940 193 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 STPG3Q8N7X2 389 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 OR10G4Q8NGN3 311 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 OR10G9Q8NGN4 311 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 OR10G7Q8NGN6 311 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 NPIPB3Q92617 1050 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 ZNF702PQ9H963 129 aa14.2□□□□□ -0.14
SMARCD3-202ENST00000356800 NSD1Q96L73 2696 aaPredicted RBP14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 INAFM1C9JVW0 142 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 AP4M1O00189 453 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 YIF1AO95070 293 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 NDUFB8O95169 186 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 HBE1P02100 147 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 RND2P52198 227 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms