RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 OR1S1Q8NH92 325 aa3.05□□□□□ -1.92
CNOT4-202ENST00000356162 MITD1Q8WV92 249 aa3.05□□□□□ -1.92
CNOT4-202ENST00000356162 DCUN1D4Q92564 292 aa3.05□□□□□ -1.92
CNOT4-202ENST00000356162 ELOVL1Q9BW60 279 aa3.05□□□□□ -1.92
CNOT4-202ENST00000356162 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
CNOT4-202ENST00000356162 GAR1Q9NY12 217 aaKnown RBP3.05□□□□□ -1.92
CNOT4-202ENST00000356162 TRAV6A0A075B6T7 132 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 RPS10-NUDT3A0A1W2PQS6 291 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SEC14L6B5MCN3 397 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 G3V4G9 280 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 I3L2K1 104 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 K7EIM0 57 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 PRAF2O60831 178 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 GGCTO75223 188 aaKnown RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 IFNA21P01568 189 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 TRBV12-3P01733 135 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 ARL3P36405 182 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SNCAP37840 140 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 HTR2BP41595 481 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 ATP5IP56385 69 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 IFITM3Q01628 133 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 EGFEM1PQ0D2K5 195 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 KLF5Q13887 457 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SPSB3Q6PJ21 355 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SLC24A4Q8NFF2 622 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 DTD1Q8TEA8 209 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF431Q8TF32 576 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 DLX4Q92988 240 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 BSCL2Q96G97 398 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 TXN2Q99757 166 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 RBKSQ9H477 322 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 PALMDQ9NP74 551 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 C21orf62Q9NYP8 219 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 PEMTQ9UBM1 199 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 TENM1Q9UKZ4 2725 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 A8MWP6 167 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 LGALS9O00182 355 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 TGOLN2O43493 480 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SCGB2A1O75556 95 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 HOXB5P09067 269 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 NPY1RP25929 384 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 GPR183P32249 361 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 MFAP4P55083 255 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 TATDN3Q17R31 274 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 ACSM6Q6P461 480 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 CLEC19AQ6UXS0 136 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 DUSP18Q8NEJ0 188 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 OR52B4Q8NGK2 314 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 RNASEH2CQ8TDP1 164 aaKnown RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 CIB3Q96Q77 187 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SEC22CQ9BRL7 303 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF436Q9C0F3 470 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 HIPK2Q9H2X6 1198 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 GPN1Q9HCN4 374 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 HEYLQ9NQ87 328 aaPredicted RBP3.04□□□□□ -1.92
CNOT4-202ENST00000356162 SIGLEC8Q9NYZ4 499 aa3.04□□□□□ -1.92
CNOT4-202ENST00000356162 PPP5D1E7EU14 171 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 ADAP1O75689 374 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 NXPH3O95157 252 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 PTTG1O95997 202 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 MT-CO2P00403 227 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 IGHV3-23P01764 117 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 SLC25A4P12235 298 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 ELLP55199 621 aaPredicted RBP3.03□□□□□ -1.92
CNOT4-202ENST00000356162 SYNJ2BPP57105 145 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 RELQ04864 619 aaPredicted RBP3.03□□□□□ -1.92
CNOT4-202ENST00000356162 DCTN2Q13561 401 aaKnown RBP3.03□□□□□ -1.92
CNOT4-202ENST00000356162 Q56UQ5 140 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 PLET1Q6UQ28 207 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 GPHB5Q86YW7 130 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 C12orf45Q8N5I9 185 aaPredicted RBP3.03□□□□□ -1.92
CNOT4-202ENST00000356162 ZBTB8BQ8NAP8 495 aaPredicted RBP3.03□□□□□ -1.92
CNOT4-202ENST00000356162 OR4D5Q8NGN0 318 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 OR9G4Q8NGQ1 327 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 OR2K2Q8NGT1 345 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 SCARB1Q8WTV0 552 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 TMEM190Q8WZ59 177 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 U3KQ87 197 aa3.03□□□□□ -1.92
CNOT4-202ENST00000356162 SNRPGP15A8MWD9 76 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 INMT-MINDY4F8WBC2 141 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 WRBO00258 174 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 NDUFA4O00483 81 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 SYNGR2O43760 224 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 SAP30O75446 220 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 PLA2G1BP04054 148 aaKnown RBP3.03□□□□□ -1.93
CNOT4-202ENST00000356162 OPRK1P41145 380 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 NKX2-1P43699 371 aaPredicted RBP3.03□□□□□ -1.93
CNOT4-202ENST00000356162 NPBWR1P48145 328 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 RPP30P78346 268 aaKnown RBP3.03□□□□□ -1.93
CNOT4-202ENST00000356162 FAM106AQ4KMX7 169 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 ETFRF1Q6IPR1 90 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 NRARPQ7Z6K4 114 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 SYT8Q8NBV8 401 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 OR1S2Q8NGQ3 325 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 OR4C12Q96R67 309 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 MARVELD1Q9BSK0 173 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 AURKAIP1Q9NWT8 199 aaPredicted RBP3.03□□□□□ -1.93
CNOT4-202ENST00000356162 UFC1Q9Y3C8 167 aa3.03□□□□□ -1.93
CNOT4-202ENST00000356162 S4R3C0 116 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms