RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 PSG5Q15238 335 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 ASPHD1Q5U4P2 390 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 Q6ZUT4 128 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 OR10X1Q8NGY0 326 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 LSM4Q9Y4Z0 139 aaKnown RBP12.89□□□□□ -0.35
RTN3-205ENST00000356000 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 OTOL1A6NHN0 477 aaPredicted RBP12.89□□□□□ -0.35
RTN3-205ENST00000356000 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 ZNF816Q0VGE8 651 aaPredicted RBP12.89□□□□□ -0.35
RTN3-205ENST00000356000 SLC25A53Q5H9E4 307 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 PPP1R32Q7Z5V6 425 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 SYT8Q8NBV8 401 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 C1orf159Q96HA4 380 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 HARBI1Q96MB7 349 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 PRO0461Q9UI25 63 aa12.89□□□□□ -0.35
RTN3-205ENST00000356000 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 MYF5P13349 255 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 EXPH5Q8NEV8 1989 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
RTN3-205ENST00000356000 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
RTN3-205ENST00000356000 CD24P25063 80 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 FXYD2P54710 66 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 TMUB1Q9BVT8 246 aa12.88□□□□□ -0.35
RTN3-205ENST00000356000 DIDO1Q9BTC0 2240 aaKnown RBP12.87□□□□□ -0.35
RTN3-205ENST00000356000 ARL3P36405 182 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 RUNX3Q13761 415 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 MIR17HGQ75NE6 70 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 MBNL3Q9NUK0 354 aaKnown RBP12.87□□□□□ -0.35
RTN3-205ENST00000356000 RP1P56715 2156 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 ZNF138P52744 262 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 XGP55808 180 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 GAGE13Q4V321 117 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 LINC00696Q6ZRV3 163 aa12.87□□□□□ -0.35
RTN3-205ENST00000356000 H3BMG7 143 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 MGST3O14880 152 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 H2BFWTQ7Z2G1 175 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 A8MWL6 223 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 RPL30P62888 115 aaKnown RBP12.86□□□□□ -0.35
RTN3-205ENST00000356000 FOXI1Q12951 378 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 ZNF146Q15072 292 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 PLPPR2Q96GM1 343 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 CACNA1HO95180 2353 aa12.86□□□□□ -0.35
RTN3-205ENST00000356000 ZNF407Q9C0G0 2248 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
RTN3-205ENST00000356000 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 LINC00596Q86U02 117 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 BCL6BQ8N143 479 aaPredicted RBP12.85□□□□□ -0.35
RTN3-205ENST00000356000 CHRNA10Q9GZZ6 450 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 K7ERJ3 54 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 GCSHP23434 173 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 BRWD1-AS2P59051 145 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 ZBTB34Q8NCN2 500 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
RTN3-205ENST00000356000 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
RTN3-205ENST00000356000 EIF4EBP1Q13541 118 aaPredicted RBP12.84□□□□□ -0.35
RTN3-205ENST00000356000 FGF23Q9GZV9 251 aaPredicted RBP12.84□□□□□ -0.35
RTN3-205ENST00000356000 IGLL5B9A064 214 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 H0Y8X5 98 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 KLK10O43240 276 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 APOMO95445 188 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 LGALS9CQ6DKI2 356 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 MKXQ8IYA7 352 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
RTN3-205ENST00000356000 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
RTN3-205ENST00000356000 TM4SF5O14894 197 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 HIGD1BQ9P298 99 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
RTN3-205ENST00000356000 VCANP13611 3396 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 C17orf98A8MV24 154 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 FNDC10F2Z333 226 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 NHLRC4P0CG21 123 aaPredicted RBP12.83□□□□□ -0.36
RTN3-205ENST00000356000 PRR20EP86478 221 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 PRR20CP86479 221 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 PRR20DP86480 221 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 PRR20BP86481 221 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 PRR20AP86496 221 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 C16orf47Q6ZP98 133 aaPredicted RBP12.83□□□□□ -0.36
RTN3-205ENST00000356000 PLEKHA3Q9HB20 300 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 YAE1D1Q9NRH1 226 aa12.83□□□□□ -0.36
RTN3-205ENST00000356000 C5orf49A4QMS7 147 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 CSN1S1P47710 185 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 FHL3Q13643 280 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
RTN3-205ENST00000356000 ACTL6BO94805 426 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 CA6P23280 308 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms