RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 FAM122CQ6P4D5 195 aa16.19■□□□□ 0.18
TRIM4-202ENST00000354241 UNQ5815/PRO19632Q6UWF5 114 aa16.19■□□□□ 0.18
TRIM4-202ENST00000354241 C9orf139Q6ZV77 190 aa16.19■□□□□ 0.18
TRIM4-202ENST00000354241 SSX7Q7RTT5 188 aa16.19■□□□□ 0.18
TRIM4-202ENST00000354241 RPP25LQ8N5L8 163 aaKnown RBP16.19■□□□□ 0.18
TRIM4-202ENST00000354241 STPG3Q8N7X2 389 aa16.19■□□□□ 0.18
TRIM4-202ENST00000354241 ZANQ9Y493 2812 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 LINC01548A6NM66 108 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 YIF1AO95070 293 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 RPL29P47914 159 aaKnown RBP16.18■□□□□ 0.18
TRIM4-202ENST00000354241 LCN15Q6UWW0 184 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 EIF4E3Q8N5X7 224 aaKnown RBP16.18■□□□□ 0.18
TRIM4-202ENST00000354241 BPIFCQ8NFQ6 507 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 TMUB1Q9BVT8 246 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 SLC25A22Q9H936 323 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 SLC45A2Q9UMX9 530 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 HECTD1Q9ULT8 2610 aa16.18■□□□□ 0.18
TRIM4-202ENST00000354241 I3L2K1 104 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 EIF3GO75821 320 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM4-202ENST00000354241 SPSB3Q6PJ21 355 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 CCDC28AQ8IWP9 274 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 SLC39A9Q9NUM3 307 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 ITPR2Q14571 2701 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 ZNF469Q96JG9 3925 aaPredicted RBP16.17■□□□□ 0.18
TRIM4-202ENST00000354241 ZFP92A6NM28 416 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 HBE1P02100 147 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 SPNS3Q6ZMD2 512 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 IL17RELQ6ZVW7 336 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 ACTR3CQ9C0K3 210 aaPredicted RBP16.17■□□□□ 0.18
TRIM4-202ENST00000354241 TNFRSF19Q9NS68 423 aa16.17■□□□□ 0.18
TRIM4-202ENST00000354241 M0QZK8 103 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 CYB5BO43169 146 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 TSPAN9O75954 239 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 GATA2P23769 480 aaPredicted RBP16.16■□□□□ 0.18
TRIM4-202ENST00000354241 IER3P46695 156 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 CCL20P78556 96 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 PRR20EP86478 221 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 PRR20CP86479 221 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 PRR20DP86480 221 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 PRR20BP86481 221 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 PRR20AP86496 221 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 CYP2G1PQ6ZSU1 146 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 C16orf82Q7Z2V1 217 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 THAP8Q8NA92 274 aa16.16■□□□□ 0.18
TRIM4-202ENST00000354241 IGLV11-55A0A075B6I3 123 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 FGF8P55075 233 aaPredicted RBP16.15■□□□□ 0.18
TRIM4-202ENST00000354241 COMMD1Q8N668 190 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 FAM110DQ8TAY7 271 aaPredicted RBP16.15■□□□□ 0.18
TRIM4-202ENST00000354241 MBD3L1Q8WWY6 194 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 ZNF48Q96MX3 618 aaPredicted RBP16.15■□□□□ 0.18
TRIM4-202ENST00000354241 FANCD2OSQ96PS1 177 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 TMEM231Q9H6L2 316 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 IGKV1D-37A0A075B6S9 117 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 CTXND1A0A1B0GTU2 59 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 MAP1LC3B2A6NCE7 125 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 BTBD17A6NE02 478 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 K7EIM0 57 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 HMGB3O15347 200 aaKnown RBP16.15■□□□□ 0.18
TRIM4-202ENST00000354241 LINC00869P0C866 280 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 SRSF3P84103 164 aaKnown RBP16.15■□□□□ 0.18
TRIM4-202ENST00000354241 TMEM116Q8NCL8 245 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 MAP1LC3BQ9GZQ8 125 aa16.15■□□□□ 0.18
TRIM4-202ENST00000354241 TCRBV4S1A1TA0A5B7 111 aa16.14■□□□□ 0.17
TRIM4-202ENST00000354241 G3V318 75 aa16.14■□□□□ 0.17
TRIM4-202ENST00000354241 CDC34P49427 236 aaPredicted RBP16.14■□□□□ 0.17
TRIM4-202ENST00000354241 TOR2AQ5JU69 321 aa16.14■□□□□ 0.17
TRIM4-202ENST00000354241 UQCC3Q6UW78 93 aa16.14■□□□□ 0.17
TRIM4-202ENST00000354241 OR5R1Q8NH85 324 aa16.14■□□□□ 0.17
TRIM4-202ENST00000354241 A0A1W2PPV4 95 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 ZNF90Q03938 601 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 Q6YL49 198 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 TEX29Q8N6K0 151 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 RAB24Q969Q5 203 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 NARS2Q96I59 477 aaKnown RBP16.13■□□□□ 0.17
TRIM4-202ENST00000354241 TMEM68Q96MH6 324 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 TREM1Q9NP99 234 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 TRAV1-1A0A0B4J248 108 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 CD5LO43866 347 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 OR2J3O76001 311 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 DEFA5Q01523 94 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 KRTAP1-1Q07627 177 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 AKIRIN2Q53H80 203 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 GSX1Q9H4S2 264 aaPredicted RBP16.13■□□□□ 0.17
TRIM4-202ENST00000354241 ZNF355PQ9NSJ1 428 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 THYN1Q9P016 225 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 LINC00527Q9UJ94 153 aa16.13■□□□□ 0.17
TRIM4-202ENST00000354241 BLCAPP62952 87 aa16.12■□□□□ 0.17
TRIM4-202ENST00000354241 SLC35E3Q7Z769 313 aa16.12■□□□□ 0.17
TRIM4-202ENST00000354241 OR4X1Q8NH49 305 aa16.12■□□□□ 0.17
TRIM4-202ENST00000354241 EIF5A2Q9GZV4 153 aaKnown RBP16.12■□□□□ 0.17
TRIM4-202ENST00000354241 YAE1D1Q9NRH1 226 aa16.12■□□□□ 0.17
TRIM4-202ENST00000354241 S4R3C0 116 aa16.12■□□□□ 0.17
TRIM4-202ENST00000354241 TEX15Q9BXT5 2789 aa16.12■□□□□ 0.17
TRIM4-202ENST00000354241 TRAV41A0A0B4J266 112 aa16.11■□□□□ 0.17
TRIM4-202ENST00000354241 SEC14L6B5MCN3 397 aa16.11■□□□□ 0.17
TRIM4-202ENST00000354241 GUK1Q16774 197 aa16.11■□□□□ 0.17
TRIM4-202ENST00000354241 TRGV9Q99603 122 aa16.11■□□□□ 0.17
TRIM4-202ENST00000354241 NDUFB8O95169 186 aa16.11■□□□□ 0.17
TRIM4-202ENST00000354241 IGHG2P01859 326 aa16.11■□□□□ 0.17
TRIM4-202ENST00000354241 HIST1H1BP16401 226 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms