RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 KLRC4-KLRK1H3BQV0 150 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 HBBP68871 147 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 MZT1Q08AG7 82 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 ACP7Q6ZNF0 438 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 SSX8Q7RTT4 187 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 UBALD2Q8IYN6 164 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 COQ2Q96H96 371 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 FNDC4Q9H6D8 234 aaPredicted RBP8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 HSPB8Q9UJY1 196 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 SOX21Q9Y651 276 aaPredicted RBP8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 TET2Q6N021 2002 aaPredicted RBP8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 PPIAL4DF5H284 164 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 FCGR3BO75015 233 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 HIST1H1EP10412 219 aaKnown RBP8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 C7orf69Q9H7B7 122 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 JPT1Q9UK76 154 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 PSG11Q9UQ72 335 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 C8orf88P0DMB2 117 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 CD46P15529 392 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 CAMPP49913 170 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 AESQ08117 197 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 CR1LQ2VPA4 569 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 FAM90A1Q86YD7 464 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 ZC2HC1AQ96GY0 325 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 MRPL32Q9BYC8 188 aaKnown RBP8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 NPFFR1Q9GZQ6 430 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 JKAMPQ9P055 326 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 HCFC1P51610 2035 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 PRUNE2Q8WUY3 3088 aa8.42□□□□□ -1.06
CHRNA1-202ENST00000348749 C15orf61A6NNL5 157 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 VWC2LB2RUY7 222 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 C15orf65H3BRN8 121 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 PROP1O75360 226 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 GRPP07492 148 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 GPR12P47775 334 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 C11orf53Q8IXP5 236 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 LRRC29Q8WV35 223 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 RAB9BQ9NP90 201 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 TMEM140Q9NV12 185 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 LAMA1P25391 3075 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 TRAV3A0A0B4J244 114 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 A0A1B0GV72 72 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 APOA2P02652 100 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 ZNF883P0CG24 379 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 FGF6P10767 208 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 CEBPDP49716 269 aaPredicted RBP8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 MEOX1P50221 254 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 C16orf54Q6UWD8 224 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 MDS2Q8NDY4 140 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 OR10AG1Q8NH19 301 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 VSTM2AQ8TAG5 236 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 PPP1R35Q8TAP8 253 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 SLC25A33Q9BSK2 321 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 NDFIP1Q9BT67 221 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 C12orf49Q9H741 205 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 OBP2BQ9NPH6 170 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 SH3BGRL2Q9UJC5 107 aa8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
CHRNA1-202ENST00000348749 EYSQ5T1H1 3165 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 MUC3AQ02505 3323 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 A0A0G2JLM5 398 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 H3BUT2 72 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 PEX7O00628 323 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 CT83Q5H943 113 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 WDR82Q6UXN9 313 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 KLF14Q8TD94 323 aaPredicted RBP8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 CLUHP3Q96NS8 147 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 HES7Q9BYE0 225 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 AMMECR1Q9Y4X0 333 aaPredicted RBP8.4□□□□□ -1.06
CHRNA1-202ENST00000348749 NCOR1O75376 2440 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 IGHV3-43A0A0B4J1X8 118 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 TMEM189A5PLL7 270 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 GNG7O60262 68 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 IGHV3-43DP0DP04 118 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 FOXA3P55318 350 aaPredicted RBP8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 PLP1P60201 277 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 HSPE1P61604 102 aaKnown RBP8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 HSD52Q0P140 79 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 FOXE3Q13461 319 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 Q6ZR03 302 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 C1orf162Q8NEQ5 155 aaPredicted RBP8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 OR13A1Q8NGR1 328 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 FAM167A-AS1Q96KT0 104 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 LINC00479Q96M42 142 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 TMEM14BQ9NUH8 114 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 PPIAL4EA0A075B759 164 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 PPIAL4CA0A0B4J2A2 164 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 F2RL2O00254 374 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 SIVA1O15304 175 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 PPIAL4FP0DN26 164 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 KIR3DS1Q14943 382 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms