RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 F2Z2F3 143 aa19.19■□□□□ 0.66
NPAS3-201ENST00000346562 HBDP02042 147 aa19.19■□□□□ 0.66
NPAS3-201ENST00000346562 PGPEP1LA6NFU8 196 aa19.19■□□□□ 0.66
NPAS3-201ENST00000346562 DPM2O94777 84 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 TDGF1P3P51864 188 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 SPOCK3Q9BQ16 436 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 SPCS1Q9Y6A9 102 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 LINC01549A6NIU2 74 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 ZNF672Q499Z4 452 aaPredicted RBP19.18■□□□□ 0.66
NPAS3-201ENST00000346562 TYMSP04818 313 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 ST6GALNAC6Q969X2 333 aa19.18■□□□□ 0.66
NPAS3-201ENST00000346562 RNASE7Q9H1E1 156 aaKnown RBP19.18■□□□□ 0.66
NPAS3-201ENST00000346562 TUBGCP6Q96RT7 1819 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 IGHV2-26A0A0B4J1V2 119 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 A0A1W2PRE2 83 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 RAMP3O60896 148 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 LDLRAD4O15165 306 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 IGHV4-39P01824 125 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 S100A7L2Q5SY68 101 aa19.17■□□□□ 0.66
NPAS3-201ENST00000346562 CD59P13987 128 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 MINOS1Q5TGZ0 78 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 COQ2Q96H96 371 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 MINOS1-NBL1R4GNA1 71 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 IGKV1D-13A0A0B4J2D9 117 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 PINLYPA6NC86 204 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 IGKV1-13P0DP09 117 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 ZCCHC24Q8N2G6 241 aaKnown RBP19.16■□□□□ 0.66
NPAS3-201ENST00000346562 DUTP33316 252 aaKnown RBP19.16■□□□□ 0.66
NPAS3-201ENST00000346562 B4DSR2 109 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 NTN3O00634 580 aaPredicted RBP19.16■□□□□ 0.66
NPAS3-201ENST00000346562 PYYP10082 97 aa19.16■□□□□ 0.66
NPAS3-201ENST00000346562 RPL23P62829 140 aaKnown RBP19.16■□□□□ 0.66
NPAS3-201ENST00000346562 OOSP1A8MZH6 123 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 PLNP26678 52 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 CKS1BP61024 79 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 GFI1BQ5VTD9 330 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 OSTCQ9NRP0 149 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 MBNL3Q9NUK0 354 aaKnown RBP19.15■□□□□ 0.66
NPAS3-201ENST00000346562 TRAV12-3A0A0B4J271 114 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 RCHY1Q96PM5 261 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 CD33P20138 364 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 FAM89BQ8N5H3 189 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 SRD5A1P18405 259 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 DEFB121Q5J5C9 76 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 FAM19A2Q8N3H0 131 aa19.15■□□□□ 0.66
NPAS3-201ENST00000346562 CDK2AP2O75956 126 aa19.14■□□□□ 0.66
NPAS3-201ENST00000346562 TFF1P04155 84 aa19.14■□□□□ 0.66
NPAS3-201ENST00000346562 LINC00614P0C842 121 aa19.14■□□□□ 0.66
NPAS3-201ENST00000346562 MORN3Q6PF18 240 aaPredicted RBP19.14■□□□□ 0.66
NPAS3-201ENST00000346562 SLC25A2Q9BXI2 301 aa19.14■□□□□ 0.66
NPAS3-201ENST00000346562 A0A1B0GV90 55 aa19.14■□□□□ 0.65
NPAS3-201ENST00000346562 LAIR2Q6ISS4 152 aa19.14■□□□□ 0.65
NPAS3-201ENST00000346562 FBLN5Q9UBX5 448 aa19.14■□□□□ 0.65
NPAS3-201ENST00000346562 PLSCR4Q9NRQ2 329 aa19.14■□□□□ 0.65
NPAS3-201ENST00000346562 A0A087WX48 190 aa19.14■□□□□ 0.65
NPAS3-201ENST00000346562 ASCL4Q6XD76 172 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 PRDM13Q9H4Q3 707 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 ZFC3H1O60293 1989 aaKnown RBP19.13■□□□□ 0.65
NPAS3-201ENST00000346562 TRAV2A0A0B4J234 112 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 SHISA3A0PJX4 238 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 TPTE2P1Q5T6R2 138 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 C5orf30Q96GV9 206 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 COL11A1P12107 1806 aaPredicted RBP19.13■□□□□ 0.65
NPAS3-201ENST00000346562 GNLYP22749 145 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 LINC00158P58513 81 aa19.13■□□□□ 0.65
NPAS3-201ENST00000346562 PRR32B1ATL7 298 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 SSBP4Q9BWG4 385 aaPredicted RBP19.12■□□□□ 0.65
NPAS3-201ENST00000346562 PSCAO43653 123 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 SPSB3Q6PJ21 355 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 RNF5Q99942 180 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 CST9LQ9H4G1 147 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 IGKCP01834 107 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 SRSF7Q16629 238 aaKnown RBP eCLIP19.12■□□□□ 0.65
NPAS3-201ENST00000346562 WFDC12Q8WWY7 111 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 ADMP35318 185 aa19.12■□□□□ 0.65
NPAS3-201ENST00000346562 CA1P00915 261 aaPredicted RBP19.11■□□□□ 0.65
NPAS3-201ENST00000346562 PTPRZ1P23471 2315 aaPredicted RBP19.11■□□□□ 0.65
NPAS3-201ENST00000346562 IGHV1-8P0DP01 117 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 NIT1Q86X76 327 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 LINC00527Q9UJ94 153 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 LRRC37AA6NMS7 1700 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 C15orf32Q32M92 178 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 LINC00518Q8N0U6 118 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
NPAS3-201ENST00000346562 EVI2AP22794 236 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 FOXF2Q12947 444 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 TRBV7-1A0A0A6YYK4 115 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 GGTLC3B5MD39 225 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 LINC00587B1AMM8 73 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 PPIFP30405 207 aaKnown RBP19.1■□□□□ 0.65
NPAS3-201ENST00000346562 EFNB3Q15768 340 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 TRAV8-2A0A0B4J237 113 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 A0A1B0GV72 72 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 HOXA3O43365 443 aaPredicted RBP19.1■□□□□ 0.65
NPAS3-201ENST00000346562 CHCHD1Q96BP2 118 aaKnown RBP19.1■□□□□ 0.65
NPAS3-201ENST00000346562 NRN1Q9NPD7 142 aa19.1■□□□□ 0.65
NPAS3-201ENST00000346562 RNF222A6NCQ9 220 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 MLNRO43193 412 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 ASCC3Q8N3C0 2202 aaKnown RBP19.09■□□□□ 0.65
NPAS3-201ENST00000346562 M0R1W7 72 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms