RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 SLC25A15Q9Y619 301 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 PI4KAP42356 2102 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 RHOGP84095 191 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 OR9G4Q8NGQ1 327 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 ABCA4P78363 2273 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 OR11H12B2RN74 326 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 C9JCJ5 164 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 OR1N2Q8NGR9 330 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 TRAV24A0A0B4J272 114 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 CSN3P07498 182 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 C8orf88P0DMB2 117 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF525Q8N782 197 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 SGK494Q96LW2 274 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 KIF26AQ9ULI4 1882 aaPredicted RBP9.03□□□□□ -0.96
CLCN6-202ENST00000346436 TRGV11A0A075B6L2 103 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 CXCL1P09341 107 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 TMEM183BQ1AE95 376 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 RNF5Q99942 180 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 DCAF16Q9NXF7 216 aa9.03□□□□□ -0.96
CLCN6-202ENST00000346436 MALP21145 153 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 DDTP30046 118 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 PRSS8Q16651 343 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 DEFB113Q30KQ7 82 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 LCNL1Q6ZST4 164 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 GGNQ86UU5 652 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 HAPLN4Q86UW8 402 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 TEX45Q8NA69 505 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 USMG5Q96IX5 58 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 PRADC1Q9BSG0 188 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 PLSCR2Q9NRY7 297 aa9.02□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF841Q6ZN19 808 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 MRPL20Q9BYC9 149 aaKnown RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 DIDO1Q9BTC0 2240 aaKnown RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 COL4A4P53420 1690 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF207O43670 478 aaKnown RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 GHRHP01286 108 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 PSMB2P49721 201 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 IGHV3OR16-13A0A075B7E8 117 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 IGHV3-74A0A0B4J1X5 117 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 TNFSF13O75888 250 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 CCKARP32238 428 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 NPIPB3Q92617 1050 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 C1orf147Q96MC9 270 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF257Q9Y2Q1 563 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 ALPK3Q96L96 1907 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 M0R143 59 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 CCL3L1P16619 93 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 RNASEH2CQ8TDP1 164 aaKnown RBP9.02□□□□□ -0.97
CLCN6-202ENST00000346436 NEU1Q99519 415 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 HSPB9Q9BQS6 159 aa9.02□□□□□ -0.97
CLCN6-202ENST00000346436 TMEM178BH3BS89 294 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF25P17030 456 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-202ENST00000346436 ATP5G3P48201 142 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 APOC4P55056 127 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 PAX8Q06710 450 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 ELOBQ15370 118 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 NPCDR1Q9BY65 106 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 RNF224P0DH78 156 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 WNT10AQ9GZT5 417 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 LIME1Q9H400 295 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 DMRT1Q9Y5R6 373 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
CLCN6-202ENST00000346436 VAMP3Q15836 100 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 PRR30Q53SZ7 412 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-202ENST00000346436 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 IGF2-ASQ6U949 168 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 PGPEP1LA6NFU8 196 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 IMMP2LQ96T52 175 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 POLEQ07864 2286 aa9.01□□□□□ -0.97
CLCN6-202ENST00000346436 FOXI3A8MTJ6 420 aaPredicted RBP9□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF415Q09FC8 603 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
CLCN6-202ENST00000346436 BRD3OSQ6XYD6 125 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 ROS1P08922 2347 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 IGHV3-49A0A0A0MS15 119 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 H3BTX0 84 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 SLC17A3O00476 420 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 TDGF1P13385 188 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 GATA4P43694 442 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 GCSAMLQ5JQS6 135 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 SPSB3Q6PJ21 355 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 SRSF12Q8WXF0 261 aaKnown RBP9□□□□□ -0.97
CLCN6-202ENST00000346436 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF106Q9H2Y7 1883 aaKnown RBP9□□□□□ -0.97
CLCN6-202ENST00000346436 M0R2Z0 102 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BKO60814 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BJP06899 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HOXA5P20719 270 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BOP23527 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BBP33778 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BDP58876 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BCP62807 126 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms