RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TIMM9Q9Y5J7 89 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 IGHV1-3A0A0C4DH29 117 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 hCG_1809904A0A1W2PP81 198 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PPE2 198 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PR64 198 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PRV1 198 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 SLC25A17O43808 307 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 CNTFRP26992 372 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 CD1BP29016 333 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 FGF8P55075 233 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-202ENST00000345734 RAB11AP62491 216 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 RPL8P62917 257 aaKnown RBP7.42□□□□□ -1.22
ATG4A-202ENST00000345734 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 LCN15Q6UWW0 184 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 C1orf122Q6ZSJ8 110 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 MOB3BQ86TA1 216 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 HIST3H2BBQ8N257 126 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 LFNGQ8NES3 379 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 SPATA25Q9BR10 227 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 C1orf43Q9BWL3 253 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-202ENST00000345734 LY6LH3BQJ8 138 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 OVOL3O00110 214 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 TOX4O94842 621 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 MALP21145 153 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 MC5RP33032 325 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 CEBPGP53567 150 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 MRGPRG-AS1Q2M3A8 158 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 FFAR4Q5NUL3 377 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 HCP5Q6MZN7 132 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
ATG4A-202ENST00000345734 OR2D3Q8NGH3 330 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 RPEQ96AT9 228 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 NDUFA4L2Q9NRX3 87 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 FKBP11Q9NYL4 201 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 DOK5Q9P104 306 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 WDR83OSQ9Y284 106 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 INSIG2Q9Y5U4 225 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 ABCA2Q9BZC7 2435 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 CSMD2Q7Z408 3487 aa7.41□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1B0GW64 132 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PRD5 423 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PRF3 423 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PRM7 423 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 CGB1A6NKQ9 187 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 TGOLN2O43493 480 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 DEFA4P12838 97 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 USF1P22415 310 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-202ENST00000345734 ZNF843Q8N446 348 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 LINC00482Q8N8I6 264 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 OR5B3Q8NH48 314 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 RNASE8Q8TDE3 154 aaKnown RBP7.4□□□□□ -1.22
ATG4A-202ENST00000345734 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 PBDC1Q9BVG4 233 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 BPESC1Q9GZL8 116 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 COMMD5Q9GZQ3 224 aa7.4□□□□□ -1.22
ATG4A-202ENST00000345734 TRAV1-1A0A0B4J248 108 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 RBFOX3A6NFN3 312 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 M0R1W7 72 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 HMGB3O15347 200 aaKnown RBP7.4□□□□□ -1.23
ATG4A-202ENST00000345734 GCGP01275 180 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 IGHV4-39P01824 125 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 HBE1P02100 147 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 ERVFC1-1P60608 527 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 LCN2P80188 198 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 KHDC3LQ587J8 217 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 ZNF709Q8N972 641 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 OR1L8Q8NGR8 309 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 OR4A5Q8NH83 315 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 CLDND2Q8NHS1 167 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 VSTM2AQ8TAG5 236 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 MGST2Q99735 147 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 SLC25A22Q9H936 323 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 RPS10P5Q9NQ39 176 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 KIAA1456Q9P272 454 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 ZFP30Q9Y2G7 519 aa7.4□□□□□ -1.23
ATG4A-202ENST00000345734 AMMECR1Q9Y4X0 333 aaPredicted RBP7.4□□□□□ -1.23
ATG4A-202ENST00000345734 A0A1W2PPI3 338 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 SCAF4O95104 1147 aaKnown RBP7.39□□□□□ -1.23
ATG4A-202ENST00000345734 OR13C7P0DN81 318 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 RNASE2P10153 161 aaKnown RBP7.39□□□□□ -1.23
ATG4A-202ENST00000345734 PRTN3P24158 256 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 LGALS7P47929 136 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 ICAM4Q14773 271 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 VMA21Q3ZAQ7 101 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 GCSAMLQ5JQS6 135 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 KHDC1LQ5JSQ8 128 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 WDR73Q6P4I2 378 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 LHFPL4Q7Z7J7 247 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 OR11H6Q8NGC7 330 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 OR10G4Q8NGN3 311 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 OR10G9Q8NGN4 311 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 OR10G7Q8NGN6 311 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 HILPDAQ9Y5L2 63 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 ABCA1O95477 2261 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 MAP1LC3B2A6NCE7 125 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 ODF3BA8MYP8 253 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms