RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PILRBQ9UKJ0 227 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 RNF24Q9Y225 148 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 SRRM5B3KS81 715 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 CORTO00230 105 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 LEPROTL1O95214 131 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 FSTL3O95633 263 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 IGLC1P0CG04 106 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 SAA2P0DJI9 122 aaPredicted RBP7.85□□□□□ -1.15
HOXA1-201ENST00000343060 CXCL12P48061 93 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 RNFT1Q5M7Z0 435 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 ASPHD1Q5U4P2 390 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 ABHD17BQ5VST6 288 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 ERASQ7Z444 233 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 GCSAMQ8N6F7 178 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 PPP1R35Q8TAP8 253 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 LRRC29Q8WV35 223 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 CACNG8Q8WXS5 425 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
HOXA1-201ENST00000343060 PRSS22Q9GZN4 317 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 PEF1Q9UBV8 284 aaKnown RBP7.85□□□□□ -1.15
HOXA1-201ENST00000343060 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 WDFY3Q8IZQ1 3526 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 TRAV5A0A0B4J249 113 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 TRAV8-6A0A0B4J262 113 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 LIPFP07098 398 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 DUSP3P51452 185 aaPredicted RBP7.85□□□□□ -1.15
HOXA1-201ENST00000343060 CT45A1Q5HYN5 189 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 C6orf15Q6UXA7 325 aaPredicted RBP7.85□□□□□ -1.15
HOXA1-201ENST00000343060 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 CT45A3Q8NHU0 189 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 PMCHL2Q9BQD1 86 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 MLST8Q9BVC4 326 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF492Q9P255 531 aa7.85□□□□□ -1.15
HOXA1-201ENST00000343060 GAGE12BA1L429 117 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 SRRM4A7MD48 611 aaKnown RBP7.84□□□□□ -1.15
HOXA1-201ENST00000343060 INS-IGF2F8WCM5 200 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 IGKV3-15P01624 115 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 CFHR2P36980 270 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 CAMPP49913 170 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 C17orf58Q2M2W7 97 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 UTF1Q5T230 341 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 LINC01545Q5VT33 79 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 PMS2CLQ68D20 193 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 UFSP1Q6NVU6 142 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 C2orf91Q6ZV80 131 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 PAXXQ9BUH6 204 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 RPP21Q9H633 154 aaKnown RBP7.84□□□□□ -1.15
HOXA1-201ENST00000343060 ABI3Q9P2A4 366 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 TIMM8AO60220 97 aaPredicted RBP7.84□□□□□ -1.15
HOXA1-201ENST00000343060 SEC11AP67812 179 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 HINT2Q9BX68 163 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 GFRA4Q9GZZ7 299 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 RAB9BQ9NP90 201 aa7.84□□□□□ -1.15
HOXA1-201ENST00000343060 WDR87Q6ZQQ6 2873 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 TEX50A0A1B0GTY4 177 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 C19orf71A6NCJ1 209 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 PYYP10082 97 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 COX8AP10176 69 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 MZT1Q08AG7 82 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 MBNL2Q5VZF2 373 aaKnown RBP7.83□□□□□ -1.16
HOXA1-201ENST00000343060 OR1L4Q8NGR5 311 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 A8MWL6 223 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 DLL1O00548 723 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 GPR183P32249 361 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 MEOX1P50221 254 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 GTSF1Q8WW33 167 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 MAP1LC3CQ9BXW4 147 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 HSPB8Q9UJY1 196 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 DSCAML1Q8TD84 2053 aa7.83□□□□□ -1.16
HOXA1-201ENST00000343060 LOC102724200A0A096LPH7 203 aaPredicted RBP7.82□□□□□ -1.16
HOXA1-201ENST00000343060 IGHV3-13P01766 116 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 IGHV3-7P01780 117 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 ARF6P62330 175 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 MLANAQ16655 118 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 PATE2Q6UY27 113 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 MDS2Q8NDY4 140 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 DPF1Q92782 380 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 GPR82Q96P67 336 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 SPRY4Q9C004 299 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 SPRR3Q9UBC9 169 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 KLF13Q9Y2Y9 288 aaPredicted RBP7.82□□□□□ -1.16
HOXA1-201ENST00000343060 A0A087X0K7 114 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 NPIPB6E9PJ23 425 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 COX7A2P2O60397 106 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 LYZL6O75951 148 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
HOXA1-201ENST00000343060 C10orf113Q5VZT2 155 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 THAP8Q8NA92 274 aa7.82□□□□□ -1.16
HOXA1-201ENST00000343060 ZNF430Q9H8G1 570 aaPredicted RBP7.82□□□□□ -1.16
HOXA1-201ENST00000343060 KBTBD11-OT1A0A1B0GTJ5 212 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 CER1O95813 267 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 LTAP01374 205 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 GUSBP1Q15486 140 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms