RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RNASE6Q93091 150 aaKnown RBP5.94□□□□□ -1.46
VCAN-202ENST00000342785 NDUFAF3Q9BU61 184 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 IGKV1-39P01597 117 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 IGKV3-15P01624 115 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 IGKV1D-39P04432 117 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 GTF2H5Q6ZYL4 71 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 OR5R1Q8NH85 324 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 AP5S1Q9NUS5 200 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 OTOGLQ3ZCN5 2332 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 DENND4CQ5VZ89 1909 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.94□□□□□ -1.46
VCAN-202ENST00000342785 FOXI3A8MTJ6 420 aaPredicted RBP5.94□□□□□ -1.46
VCAN-202ENST00000342785 TCF21O43680 179 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 TIMP3P35625 211 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 FAM53AQ6NSI3 398 aaPredicted RBP5.94□□□□□ -1.46
VCAN-202ENST00000342785 WNT10AQ9GZT5 417 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 RABAC1Q9UI14 185 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 LYNX1G3V0Z9 82 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 LYNX1P0DP58 116 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 CTAG1AP78358 180 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 ZNF738Q8NE65 137 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 ZNF257Q9Y2Q1 563 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 SLC25A34Q6PIV7 304 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 CEP295Q9C0D2 2601 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 PRR14LQ5THK1 2151 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 MYOD1P15172 320 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 SSC4DQ8WTU2 575 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 COL4A3Q01955 1670 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 CGB1A6NKQ9 187 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 TWIST1Q15672 202 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 PPP1R27Q86WC6 154 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 TMEM133Q9H2Q1 129 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 DKK1O94907 266 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 KCNS1Q96KK3 526 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 NRN1Q9NPD7 142 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 FOXA2Q9Y261 457 aaPredicted RBP5.93□□□□□ -1.46
VCAN-202ENST00000342785 ERVK11-1P61568 191 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 FOXL1Q12952 345 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 IGHV3OR16-8A0A075B7F1 116 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 TRAV5A0A0B4J249 113 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 LMO1P25800 156 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 ADMP35318 185 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 GNG5P63218 68 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 TMEM70Q9BUB7 260 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 ZFP30Q9Y2G7 519 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 FREM1Q5H8C1 2179 aa5.93□□□□□ -1.46
VCAN-202ENST00000342785 SIAH2O43255 324 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 HLA-DRB1P01911 266 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 LOXL3P58215 753 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 C10orf91Q5T1B1 145 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 ZNF474Q6S9Z5 364 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 TMEM136Q6ZRR5 245 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 MGST2Q99735 147 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 PRDM13Q9H4Q3 707 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 MYO9AB2RTY4 2548 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 CA1P00915 261 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 NMUP48645 174 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 C2orf83Q53S99 150 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 WDR86Q86TI4 376 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 C21orf62Q9NYP8 219 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 FRMPD3Q5JV73 1810 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 A0A1B0GUT8 65 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 MBD3L4A6NDZ8 208 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 MBD3L3A6NE82 208 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 MBD3L5A6NJ08 208 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 PF4V1P10720 104 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 TMPRSS3P57727 454 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 SAPCD1Q5SSQ6 148 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 C12orf54Q6X4T0 127 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 Q8NFD4 153 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 MBD3L2Q8NHZ7 208 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 C14orf144Q96I85 54 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 NCOA6Q14686 2063 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 TCRBV4S1A1TA0A5B7 111 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 IZUMO1RA6ND01 250 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 IGKV1D-33P01593 117 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 IGKV1-33P01594 117 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 Q6ZR03 302 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 A6NDN8 102 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 RELQ04864 619 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 TMEM97Q5BJF2 176 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 WFDC3Q8IUB2 231 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 ATG101Q9BSB4 218 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 SSBP4Q9BWG4 385 aaPredicted RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 EPDR1Q9UM22 224 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 IGF2RP11717 2491 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 TMEM256Q8N2U0 113 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 Q9H3A6 140 aa5.92□□□□□ -1.46
VCAN-202ENST00000342785 RPP21Q9H633 154 aaKnown RBP5.92□□□□□ -1.46
VCAN-202ENST00000342785 CD24P25063 80 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 SCGB1D4Q6XE38 83 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 TCF24Q7RTU0 167 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 TEX45Q8NA69 505 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms