RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 HIST1H2BKO60814 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BJP06899 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BOP23527 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 IGFBP6P24592 240 aaPredicted RBP10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BBP33778 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BDP58876 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BCP62807 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST2H2BEQ16778 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BHQ93079 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BNQ99877 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BMQ99879 126 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 A0A1W2PQD3 144 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 PTGDSP41222 190 aa10.87□□□□□ -0.67
USP47-202ENST00000339865 PLXNA1Q9UIW2 1896 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 UBE2V1Q13404 147 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 TMEM170AQ8WVE7 144 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 TRAV12-1A0A0B4J245 112 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
USP47-202ENST00000339865 GNG5P63218 68 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 TMEM187Q14656 261 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 DRAM1Q8N682 238 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 SPANXA1Q9NS26 97 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 IFITM1P13164 125 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 SRD5A1P18405 259 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 RPL23P62829 140 aaKnown RBP10.86□□□□□ -0.67
USP47-202ENST00000339865 WFDC12Q8WWY7 111 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 TRAV9-1A0A075B6T8 112 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 DTX2Q86UW9 622 aa10.86□□□□□ -0.67
USP47-202ENST00000339865 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 PRSS23O95084 383 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 ZNF708P17019 499 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 RPL39P5Q59GN2 51 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 ABHD17AQ96GS6 310 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 NPIPB13A6NJU9 1138 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 FAM214BQ7L5A3 538 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 CRIM1Q9NZV1 1036 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 GUSBP1Q15486 140 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 CHCHD1Q96BP2 118 aaKnown RBP10.85□□□□□ -0.67
USP47-202ENST00000339865 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
USP47-202ENST00000339865 ARAP2Q8WZ64 1704 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 IRF3Q14653 427 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 GAGE12JA6NER3 117 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 H3BMM0 161 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 MLNRO43193 412 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 VDAC2P45880 294 aaPredicted RBP10.85□□□□□ -0.67
USP47-202ENST00000339865 GAGE1Q13065 139 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 GAGE4Q13068 117 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 GAGE5Q13069 117 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 GAGE6Q13070 117 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 FAM27BQ5VT28 67 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 Q6ZNB5 142 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 ZAR1Q86SH2 424 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 PPP1R27Q86WC6 154 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 HIST1H2BLQ99880 126 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 GNB1LQ9BYB4 327 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 PATE3B3GLJ2 98 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 DRD3P35462 400 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 FAM168AQ92567 244 aa10.85□□□□□ -0.67
USP47-202ENST00000339865 MIR17HGQ75NE6 70 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 LINC01560Q8TB33 94 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 ASCL2Q99929 193 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 UBE2CO00762 179 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
USP47-202ENST00000339865 CARHSP1Q9Y2V2 147 aaKnown RBP10.84□□□□□ -0.67
USP47-202ENST00000339865 HS3ST3B1Q9Y662 390 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 RREB1Q92766 1687 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 TNFSF13O75888 250 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 TMEM258P61165 79 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 TMEM167AQ8TBQ9 72 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 ABCA3Q99758 1704 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 ZNRF1Q8ND25 227 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 A0A087WX48 190 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 NDUFA2O43678 99 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 NEUROG3Q9Y4Z2 214 aa10.84□□□□□ -0.67
USP47-202ENST00000339865 IGHV3-73A0A0B4J1V6 119 aa10.83□□□□□ -0.67
USP47-202ENST00000339865 IGKV1D-33P01593 117 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 IGKV1-33P01594 117 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 ACTL10Q5JWF8 245 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 NRTNQ99748 197 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 hADV29S1A0JD25 119 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 TCRAP04437 139 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 FSTP19883 344 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 IGLV3-16A0A075B6K0 115 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 RPL35AP18077 110 aaKnown RBP10.83□□□□□ -0.68
USP47-202ENST00000339865 OR9G1Q8NH87 305 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 FAM57AQ8TBR7 257 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 SCN7AQ01118 1682 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 CEACAM1P13688 526 aa10.83□□□□□ -0.68
USP47-202ENST00000339865 C1QTNF9P0C862 333 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 DUTP33316 252 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms