RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 RNF24Q9Y225 148 aa13.16□□□□□ -0.3
SCARB1-202ENST00000339570 TEX50A0A1B0GTY4 177 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 A0A1B0GWJ7 208 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 CSN3P07498 182 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 ZNF138P52744 262 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 PRR20EP86478 221 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 PRR20CP86479 221 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 PRR20DP86480 221 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 PRR20BP86481 221 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 PRR20AP86496 221 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 BHLHA15Q7RTS1 189 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-202ENST00000339570 SFXN3Q9BWM7 321 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 GSX1Q9H4S2 264 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-202ENST00000339570 TMEM167BQ9NRX6 74 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 AMY1AP04745 511 aa13.15□□□□□ -0.3
SCARB1-202ENST00000339570 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-202ENST00000339570 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.31
SCARB1-202ENST00000339570 AREGP15514 252 aa13.15□□□□□ -0.31
SCARB1-202ENST00000339570 STUMQ69YW2 141 aa13.15□□□□□ -0.31
SCARB1-202ENST00000339570 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.31
SCARB1-202ENST00000339570 LAMTOR2Q9Y2Q5 125 aa13.15□□□□□ -0.31
SCARB1-202ENST00000339570 ANKRD11Q6UB99 2663 aaPredicted RBP13.14□□□□□ -0.31
SCARB1-202ENST00000339570 KLF3P57682 345 aaPredicted RBP13.14□□□□□ -0.31
SCARB1-202ENST00000339570 NIT1Q86X76 327 aa13.14□□□□□ -0.31
SCARB1-202ENST00000339570 RBMXL3Q8N7X1 1067 aaKnown RBP13.14□□□□□ -0.31
SCARB1-202ENST00000339570 Q8N976 141 aa13.14□□□□□ -0.31
SCARB1-202ENST00000339570 MRPL20Q9BYC9 149 aaKnown RBP13.14□□□□□ -0.31
SCARB1-202ENST00000339570 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
SCARB1-202ENST00000339570 ARL2-SNX15V9GYD0 113 aa13.14□□□□□ -0.31
SCARB1-202ENST00000339570 DEFB109BQ30KR1 87 aa13.14□□□□□ -0.31
SCARB1-202ENST00000339570 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
SCARB1-202ENST00000339570 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 CD59P13987 128 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 RPL19P84098 196 aaKnown RBP13.13□□□□□ -0.31
SCARB1-202ENST00000339570 OR1B1Q8NGR6 318 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 OR5B3Q8NH48 314 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 OR8B2Q96RD0 313 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 TPPP3Q9BW30 176 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 KBTBD11-OT1A0A1B0GTJ5 212 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 C9JCJ5 164 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 TAS2R45P59539 299 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 GDF5OSQ5U4N7 250 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
SCARB1-202ENST00000339570 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 SNAI2O43623 268 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 TNFAIP6P98066 277 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-202ENST00000339570 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 C22orf34Q6ZV56 151 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
SCARB1-202ENST00000339570 IGLV2-8P01709 118 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 SLC25A5P05141 298 aaKnown RBP13.12□□□□□ -0.31
SCARB1-202ENST00000339570 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 Q0VG73 95 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 RTL8BQ17RB0 113 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 LINC00173Q6ZV60 143 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 DDB2Q92466 427 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 MRPL36Q9P0J6 103 aaKnown RBP13.12□□□□□ -0.31
SCARB1-202ENST00000339570 UQCR10Q9UDW1 63 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 C20orf202A1L168 122 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 NEUROG1Q92886 237 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 SLC25A33Q9BSK2 321 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 PAXXQ9BUH6 204 aa13.12□□□□□ -0.31
SCARB1-202ENST00000339570 UBE2G1P62253 170 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 PGLYRP4Q96LB8 373 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 FOXA2Q9Y261 457 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-202ENST00000339570 AKAP13Q12802 2813 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 J3QW42 95 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 RUSC1-AS1Q66K80 236 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 C11orf52Q96A22 123 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 ZNF835Q9Y2P0 537 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 BTF3P20290 206 aaKnown RBP13.11□□□□□ -0.31
SCARB1-202ENST00000339570 TMPRSS3P57727 454 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 FAM27E3Q08E93 113 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-202ENST00000339570 SAP30LQ9HAJ7 183 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 TPSG1Q9NRR2 321 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 PRNDQ9UKY0 176 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 MALRD1Q5VYJ5 2156 aa13.11□□□□□ -0.31
SCARB1-202ENST00000339570 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 UPK2O00526 184 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 CDX4O14627 284 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-202ENST00000339570 NDUFB8O95169 186 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 SPACA3Q8IXA5 215 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 SLC25A2Q9BXI2 301 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 TRGV8A0A0C4DH27 118 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms