RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 IGKV1-39P01597 117 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 APOA1P02647 267 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 IGKV1D-39P04432 117 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 CRYBB3P26998 211 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 OPRK1P41145 380 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 RPL5P46777 297 aaKnown RBP10.33□□□□□ -0.76
COMMD4-202ENST00000338995 P2RY1P47900 373 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 HOXA1P49639 335 aaPredicted RBP10.33□□□□□ -0.76
COMMD4-202ENST00000338995 SPINK9Q5DT21 86 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
COMMD4-202ENST00000338995 RNF126Q9BV68 326 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 C1QTNF4Q9BXJ3 329 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 COMMD3Q9UBI1 195 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
COMMD4-202ENST00000338995 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 A0A1B0GU03 582 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 ZNF705EA8MWA4 302 aaPredicted RBP10.32□□□□□ -0.76
COMMD4-202ENST00000338995 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
COMMD4-202ENST00000338995 RBMY1CP0DJD4 496 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 ETV6P41212 452 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 ALDH3B2P48448 385 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 RND3P61587 244 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
COMMD4-202ENST00000338995 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 SNX29P2Q8IUI4 249 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 FAM24BQ8N5W8 94 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 OR4X1Q8NH49 305 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
COMMD4-202ENST00000338995 Q8WTZ3 238 aa10.32□□□□□ -0.76
COMMD4-202ENST00000338995 FRAS1Q86XX4 4008 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 A0A0B4J293 547 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 P0DMU3 169 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 PIGPP57054 158 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
COMMD4-202ENST00000338995 SNRPD3P62318 126 aaKnown RBP10.31□□□□□ -0.76
COMMD4-202ENST00000338995 DHRS2Q13268 280 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 TRIM16LQ309B1 348 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 CCDC71LQ8N9Z2 235 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 ZFAND1Q8TCF1 268 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 COPZ2Q9P299 210 aa10.31□□□□□ -0.76
COMMD4-202ENST00000338995 HERC2O95714 4834 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 DEFB131BA0A096LNP1 70 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 C3orf85A0A1B0GTC6 90 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 B3GALNT1O75752 331 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 GIG44P09565 113 aaPredicted RBP10.3□□□□□ -0.76
COMMD4-202ENST00000338995 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
COMMD4-202ENST00000338995 HTR2BP41595 481 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 IZUMO4Q1ZYL8 232 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 RNASE10Q5GAN6 216 aaKnown RBP10.3□□□□□ -0.76
COMMD4-202ENST00000338995 Q6ZTC4 211 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 GPR141Q7Z602 305 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
COMMD4-202ENST00000338995 IGKV1-5P01602 117 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 TGFBR1P36897 503 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 PPP5CP53041 499 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 SPCS3P61009 180 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 ARRDC1Q8N5I2 433 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 OR1S2Q8NGQ3 325 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 SEPSECSQ9HD40 501 aaKnown RBP10.29□□□□□ -0.76
COMMD4-202ENST00000338995 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-202ENST00000338995 PFDN2Q9UHV9 154 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 X6R8D5 127 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 AGRNO00468 2067 aa10.29□□□□□ -0.76
COMMD4-202ENST00000338995 ELOA3CA0A087WX78 387 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-202ENST00000338995 M0QYG6 137 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 HNRNPCP07910 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
COMMD4-202ENST00000338995 SLC25A4P12235 298 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 TBPP20226 339 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 MLANAQ16655 118 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 TIGITQ495A1 244 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 PSMG4Q5JS54 123 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 ETFRF1Q6IPR1 90 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 MZT2AQ6P582 158 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 FAM219AQ8IW50 185 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 POM121L12Q8N7R1 296 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 C15orf40Q8WUR7 153 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 TP53RKQ96S44 253 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-202ENST00000338995 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
COMMD4-202ENST00000338995 FAM25AB3EWG3 89 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 FAM25CB3EWG5 89 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 FAM25GB3EWG6 89 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 GSTZ1O43708 216 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-202ENST00000338995 P0C879 139 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 PI3P19957 117 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 YPEL3P61236 119 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-202ENST00000338995 C16orf54Q6UWD8 224 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 OR52E5Q8NH55 327 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 TERB2Q8NHR7 220 aa10.27□□□□□ -0.77
COMMD4-202ENST00000338995 YIPF6Q96EC8 236 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms